<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16363

Description Uncharacterized protein
SequenceMAAEAVNQRLRDGLLELTKAAQERGTDPLIWAMQLSSRLNAAGVSMPSVEVAELLVSHICWSNNLPIAWKFLEKALTIRVVPPMLVLALLSSRVIPSRRRYPVAYRLYMELIKRYAFSLPSLINGPNYEKIMESIHDILRFDQIFGVQSSEAGVLVVEFIFSIVWELLDALLDDEGLLELTSEKKSRWPIGSQDMDIDYLDGFEGRIERQAALRKINSIMAVEIIGDFFRNKVTSRILYLARRNMPSHWECFIQHLRLLAANSSSLRNSKNITPEALLQLTSDTRQVLSRECKTSLQQQFHAVTARSPVQSPCQYHGSVRSGLWLPIDLYLEDTMDGSQVRATSSAETLTGLVKALRAINQTTWEDAFLGLWTAALRLVQRERNSSEGPVPRLDTCLCMLLSITTLAVVNIVEEEGVKLSSETEQFCTGKRNCIESVGRRREDLVSSLQRLDDFEGLLTPPPAVTPLANQAAAKAMVFLSGLSVGSGHLDGMSLNDMPLNCSGNLRHLIVEACVARNVLDTSAYLWPGYVKGRGSQIPRNISGQMPGWSSLMKGSPLTAPLVSALASTPASSLAEIERMYEIAVSGTDEEKISAATIFCGASFGRGWNIQEHVGLLIIRLLSPAVSPDFSGSESHLIGYAPFLNVLLVGISPIDCIQIFSLHGLVPQLAAALMPICEAFGSCAATMSWSLNTGEEISPHVVFSNAFTLLLKLWRFDQPPLEHVMGDITPVASRLTPEYLLLVYNSQLASYENSPKNQNKTNRLSRLSYPSSRMPIFMDAFPKLKRWYIKHQECIASTLSGLVPGNPVHQIVEALLNMMFRKVNRGGQPLAPTTSGSSSSSASGTDDSSLRLKIPAWDILEAVPFVLDAALTACAHGRLSPRELTTGLKDLADFLPASLATVVSYFSAEVTRGLWKPAYMNGTDWPSPAANLSMVEQQIKKILAATGVNVPCLDIGGNSPVTLPLPLAALVSLTITYKLDRGMDRFLNLVGPALTNLSIGCPWPCMPIITALWAQKVKRWSDFLVFSASQTVFHHNNDAVVQLLRVCFTTALGLNFYSVASHGGVGALLGHGFGSHFAGGLSAVAPGILYLRVHRAVRNVVFMTEEIVTLLMLTVKDIANSGLPADKMEKLKKTKYGTKYGQVSLSAAMNQVKLAASLGASIVWITGGLNSVQSLIKETLPSWFISDHGSDPNWSEPGGMVAMLGGYALAHFTLFSGIFAWGVDGTSPASKRRPNVLGKHLEFLASALDGKISLGCNKATWKAYVSGYLSLMVSCTPNWMLEVDVEVLKRVSKGLKQYNEEELALALLGIGGIGAMGAAAEMIMETASC
Length1328
PositionTail
OrganismHandroanthus impetiginosus
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Bignoniaceae> Crescentiina> Tabebuia alliance> Handroanthus.
Aromaticity0.08
Grand average of hydropathy0.132
Instability index47.63
Isoelectric point7.30
Molecular weight144831.97
Publications
PubMed=29253216

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16363
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     428.59|     141|     160|     335|     494|       1
---------------------------------------------------------------------------
  338-  494 (218.10/198.43)	SQVRATSSAETLTGLVKALRAIN..QTT...WEDAFLGlwtaalRLVQRERNSSeGPVP.........RLDTCLCMLLSIT...TLAVVNIVEEEGVKLSSEtEQFCTGKRNCIESVGRRREdlvsslqrLDDFEGLLTP...PPAVTPLANQAAAKAM...VFLSGLSVGSGHLDGM...SL
  495-  661 (210.49/145.59)	NDMPLNCSGNLRHLIVEACVARNvlDTSaylWPGYVKG......RGSQIPRNIS.GQMPgwsslmkgsPLTAPLVSALASTpasSLAEIERMYEIAVSGTDE.EKISAATIFCGASFGRGWN........IQEHVGLLIIrllSPAVSPDFSGSESHLIgyaPFLNVLLVGISPIDCIqifSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.62|      15|     156|      10|      24|       2
---------------------------------------------------------------------------
   10-   24 (25.98/17.66)	LRD.GLLELTKAAQER
  172-  187 (21.64/13.35)	LDDeGLLELTSEKKSR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     155.31|      49|     156|    1110|    1159|       4
---------------------------------------------------------------------------
 1110- 1159 (76.33/59.20)	LMLTVKDIANSGLPADkMEKLKKTKYGTK.YGQVSLSAAMNQVKLAASLGA
 1268- 1317 (78.98/56.46)	LSLMVSCTPNWMLEVD.VEVLKRVSKGLKqYNEEELALALLGIGGIGAMGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.88|      14|     134|    1062|    1076|       5
---------------------------------------------------------------------------
 1062- 1076 (24.17/18.51)	GGVGALLGhGFG.SHF
 1197- 1211 (24.71/13.18)	GGMVAMLG.GYAlAHF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     129.40|      39|     635|     289|     329|       9
---------------------------------------------------------------------------
  290-  329 (68.23/44.94)	RECKTSL.QQQFHAVTARSPVQSPCQYHGSvRSGLWLPIDL
  927-  966 (61.17/31.73)	PAANLSMvEQQIKKILAATGVNVPCLDIGG.NSPVTLPLPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.23|      28|     633|      48|      83|      11
---------------------------------------------------------------------------
   48-   83 (45.33/43.91)	SVEVAELLVSHICWSNNLPI...AWKFLEkaltirvvPP
  689-  719 (46.90/29.33)	SLNTGEEISPHVVFSNAFTLllkLWRFDQ........PP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.45|      24|     230|     763|     786|      12
---------------------------------------------------------------------------
  763-  786 (47.51/31.74)	LSRLS..YPSSRMPIFMDAFP.KLKRW
  993- 1019 (41.94/27.03)	LTNLSigCPWPCMPIITALWAqKVKRW
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16363 with Med33 domain of Kingdom Viridiplantae
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