<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16357

Description "Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily"
SequenceMAGAWQRRTSTVILGIVLIGSLFAYSIAKEEAAKVGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIEVKIKDGETKVFSPEEISAMVLTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDKRALGKLRRECERAKRALSSQHQVRVEIESLFDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDSGLEKRQIDEIVLVGGSTRIPKIQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTIQVFEGERSLTKDCRLLGKFDLTGIAPAPRGTPQIEVTFELDANGILNVRAEDKASGRSEKITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQNAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPGGNSEDDEDAHDEL
Length665
PositionUnknown
OrganismHandroanthus impetiginosus
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Bignoniaceae> Crescentiina> Tabebuia alliance> Handroanthus.
Aromaticity0.06
Grand average of hydropathy-0.487
Instability index31.89
Isoelectric point5.14
Molecular weight73639.55
Publications
PubMed=29253216

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16357
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     701.29|     188|     195|      38|     231|       1
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   27-  217 (276.58/210.51)	IAKEEAA..K..........................vgtVIGIDLGTTYScvGVYK....NGHVEI.IANDQGNRITpswvGFTDSERLIGEAAKNQAAVNP......ERTI.FDVKRLIGR.KFEDKEVQRDM...KLVPYKIVNK.DG....KPYIEVKIKDGETKVFSPEEISAMVLTKMKETAEAYLGKKIK...DAVVTVPAYFNDAQ.RQAT.KD..AGTIAGLNVVRIINEPTAAAIAYG
  218-  404 (221.71/152.70)	LDKKGGE..KNILVFD..............lgggtfdvsILTIDN.......GVFEvlatNGDTHL.GGEDFDQRIM.........EYFIKLIKKKHG...........KDI.SKDKRALGKlRRECERAKRALssqHQVRVEIESLfDGldfsEPLTRARFEELNNDLFR....KTMGPVK.KAMEDSGLEKRQI...DEIVLVGGSTRIPKiQQLL.KD....YFDGKEPNKGVN.PD.EAVAYG
  412-  614 (203.00/139.09)	LSGEGGDetKDILLLDvapltlgietvggvmtkliprntVIPTKKSQVFT...TYQ....DQQTTVtIQVFEGER......SLTKDCRLLGKFDLTGIAPAPrgtpqiEVTFeLDANGILNV.RAEDKASGRSE...KIT...ITND.KG.................R.LSQEEIERMV.KEAEEFAEE..DKKVKeriDARNSLETYVYNMK.NQINdKDklADKLES.DEKEKIETATKEALEWL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16357 with Med37 domain of Kingdom Viridiplantae
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