Description | Transcription factor CA150 |
Sequence | MVEHGSVPISAGTVPINDASEPPQNTTAAFGFMRPSFSYLNAINMPPGSSQQLSPNPVMQSESLGSSGSLPPMSSGLSTVEQGPSAVEKSASSPVQAMLPPASSLPSHPGPAVQAPHPGNYSFNGNMEPKQTDQSQRTHVRADGFQGMGAITSASSFTQSAPRPASQPGQPNSSPSATHFASNNYSNLATWTPPAPNYQAPIGKPNTPVTPGPPGIASSLPPPNSTIPSSLDSNVFPRTFMPAAPVLSNPSIQHHSVAMYPSPSPSPQTAPPGPWLHPQQISGFARPAFPPYAAVVPAPYPIPTRGTPPVSVSLPDIQPPGVSSAVSAVGATTTSVAAGGQLSMGSGQAELRPGVDNSKDVGKAESKHEASTKELDAWTAHRTETGIVYYYNALTGESTYEKPSGFKGESDKATVQPSPISWEKLNGTDWTLVTTNDGKRYYYNTRTQLSSWQIPSEVIELRKKQDADALKAQSVSVTNANIVAEKESDPASLSIAAANAGGRDITAVRSLSVSASPSALDLIKKKLQDSGNTDSTSPNPTLSGAVTVELNGSKPVEAPLKGIQNENNKDKRKDANGDGDMSNSSSDSDDEDGGPTKEECILQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAMSSHSARRALFEHYVRTRAEEERKEKRAAQKAALEGFKQLLEEAKEDIDQNTDYQKFKRRWGEDPRFQALDRKEREFLLNERVFSLRRAAQEREQAERAAAISNFKSMLHEKGDFTSSSRWSKVKDSLKSDPRYKAVKHEDREKLFNEYIAELKAAEEETERKAKAKQDEEEKLKERERALRKRKEREEQEVERVRQKARRKEAVESYQALLVETIKDPQASWTESKAKLEKDPQGRAANPHLDKSDLEKLFREHVKSLYERCVVEFRSLLNEVITAEAAAPETEGCKTIITSWSTANQLLKNDPRYNKMPRKERESLWRRHAEEIQRKQKKVHDQQGEEKSGEGKGRSSVDPGKHSSGSRRAHDRR |
Length | 1001 |
Position | Unknown |
Organism | Handroanthus impetiginosus |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Bignoniaceae> Crescentiina> Tabebuia alliance> Handroanthus. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.860 |
Instability index | 52.15 |
Isoelectric point | 8.66 |
Molecular weight | 109776.81 |
Publications | PubMed=29253216 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP16355 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 439.79| 66| 66| 664| 729| 1 --------------------------------------------------------------------------- 604- 659 (64.22/30.75) .........FKEMLKE..RGV.APFSKWEKelpkivF.............DPRFKA....M.SSHSARRALFEH.YVR.TRAEEERKE 664- 729 (113.74/59.64) QKAA..LEGFKQLLEEAKEDI.DQNTDYQK......FKRRWG.......EDPRFQA....L.DRKEREFLLNERVFSL.RRAAQEREQ 732- 796 (101.58/52.54) RAAA..ISNFKSMLHE.KGDF.TSSSRWSK......VKDSLK.......SDPRYKA....V.KHEDREKLFNEYIAEL.KAAEEETER 800- 835 (40.37/16.83) AK.........QDEEE.............K......LKER.........E....RA....LrKRKEREEQEVERV....RQKARR... 836- 902 (74.44/36.71) .KEA..VESYQALLVET...IkDPQASWTE......SKAKLE.......KDPQGRAanphL.DKSDLEKLFREHVKSL.YERCVVEFR 912- 959 (45.44/19.79) EAAApeTEGCKTI.......I.TS................WStanqllkNDPRYNK....M.PRKERE........SLwRRHAEE... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 356.09| 61| 61| 160| 220| 2 --------------------------------------------------------------------------- 55- 105 (55.51/19.88) ..PNPVMQSESL.GSSGSLPPMS....SGLSTveQGPSAVEKS.A.............SSP......VQAMlPP...ASSL 107- 145 (61.20/22.70) SHPGPAVQ.......AP...H..PGNYS.............FN.GN........MEPKQTD......QSQR.TH.VRADGF 160- 220 (114.15/49.02) SAPRPASQPGQP.NSSPSATHFASNNYSNLAT..WTPPAPNYQ.AP........IGKPNTP......VTPG.PP.GIASSL 235- 296 (73.01/28.57) VFPRTF.MPAAPvLSNPSIQHHS......VAM..YPSPSPSPQtAP........PGPWLHPqqisgfARPA.FP.PYAAVV 297- 348 (52.22/18.24) PAPYPIPTRGTP.PVSVSL....................PDIQ.PPgvssavsaVGATTTS......VAAG.GQlSMGSGQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 152.52| 49| 49| 352| 400| 3 --------------------------------------------------------------------------- 352- 377 (29.65/16.01) ................................RP.GVDNSKDVGKAESK.HEASTKELDA 378- 427 (72.61/51.94) WTAHRTETGIVYYYNALTGESTY........eKPsGFKGESD..KATVQpSPISWEKLNG 430- 474 (50.26/33.25) WTLVTTNDGKRYYYNTRTQLSSWqipsevielRK.KQD..ADALKAQS............ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 46.60| 14| 15| 549| 562| 4 --------------------------------------------------------------------------- 549- 562 (23.99/12.17) ELNGSKPVEAPLKG 566- 579 (22.61/11.06) ENNKDKRKDANGDG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 41.35| 15| 21| 476| 495| 5 --------------------------------------------------------------------------- 476- 495 (17.03/17.49) SVTNANIVAEKesdpaSLSI 499- 513 (24.32/11.47) NAGGRDITAVR.....SLSV --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) IQRKQKKVHDQQGEEK 2) SRRAHDRR | 960 994 | 975 1001 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab