<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16353

Description Uncharacterized protein
SequenceMEVVTQLNCTIWDSILEQTKVAQEQGSDPFLWSIQVSSNLSSFGISLPSLELAIHLVSHICWENNVPIAWKFLEKALTLKIVPPFLVLGLLSTRVIPYRRSCPAAFRLYMELLKRHCFSLKENTNLPNYQKTMTMLDKVLHLSQKFSLQANEASDLLVLYIFSIAWQLVDATLDDEGLLQLTEHEPKWPVKPQDDMDVDCHNMYEEKKKEYQERLQIINTAMSIELILIGQFLQNKVTSRILYLARENMCTHWESFIQRMQLLVENSSALRNSKSITPEVLTQLISDTHKIKSQNFQASLLKEFHLVVQSRPLVHSAGLCLGTSRSGLWLPLDMLLEDAMDGSQVNATSAVEIITGLVKSLQAISATSWHEIFLGLWMAALRLVQRERDPIEGPVPRLDTRLSMLLSITTLVVADLVEEEESVITNELEYGLASKRNVPGKRRMALIFSLQNIHDYQSLLTPPQSVIPAANQAAAKAMMFISGINVSSTYFECISTMDMPINCSGNLHHLIVEACIARNLLDTSAYFWPGYVNGRINQLPHNVPTQVPGWSSFMKGASLTPVMVNALVSTPASSFTEIEKVFEIAVNGSNDEKIAAATILCGASLIRGWNIQEHTVYFITRLLSPRVPVDYSERENHLISYAPVLNVLLVGIAPVDCVQIFSLHGLVPQLAGSVMTICEVFGSCVPTGEEISAHVVFSNAFALLLKLWRFNHPPIEYGVGDVPPVGSQLTPEYLLLVRNSHLVSSGNFLKDPNRRRLAQVASSSSPKPIFVDSFPKLKVWYRQHLACIASPLTGLVNGTPVHHNVDTLLSMMFRKIGRGNQSVTIVTSGSSSSSGPGSEDRYLRPKLPAWDILEAVPFVADAALTACAHGRLSPRELCTGLKDLADYLPATLATIVSYFSAEVTRGVWKSVFMNGTDWPSPAANLSNVEEQIKKILAATGVDVPSLAAGICTPASLPLPLAAFVSLTITYKLDKASQRFLDLAGPALESLAAGCPWPCMPIVASLWTQKAKRWSDFLVFSASRTVFLHSNDAVIQLLRSCFSTTVGLNTSCCISSNGGIGALLGHGFGSHFNGEISPVAPGILYLRVYRSIRDIMFLREEIVSLLMQTVEDIVQVSHPKDMSQKLKKSKYGSVSLAAALTKVKLAASLGASVIFLTGGLGLVQSLIKETLPSWFMSIHRSEQEGVKVGIGLLPMLRGYALAYLAALCGAFIWGIDTSSGAASKRRPKILGCHMEFLASALEGKISLGCDLATWHAYVSGFLSLMVRSTPSWICELDVELLRRLCTGLRRWNEEELALALLGVGGVGTMGSAAEMVIETSF
Length1320
PositionTail
OrganismHandroanthus impetiginosus
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Bignoniaceae> Crescentiina> Tabebuia alliance> Handroanthus.
Aromaticity0.08
Grand average of hydropathy0.195
Instability index46.43
Isoelectric point6.63
Molecular weight145066.75
Publications
PubMed=29253216

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16353
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.02|      24|      24|     902|     925|       1
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  902-  925 (45.41/29.56)	EVTRGVWKSVFMNGTDWPSPAANL
  927-  950 (38.60/24.01)	NVEEQIKKILAATGVDVPSLAAGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.07|      13|      20|     345|     357|       2
---------------------------------------------------------------------------
  345-  357 (21.92/14.71)	VNATSAVEIITGL
  364-  376 (25.15/18.09)	ISATSWHEIFLGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.75|      16|      20|    1229|    1246|       3
---------------------------------------------------------------------------
 1230- 1245 (28.27/13.86)	GCHMEFLASALEGKIS
 1247- 1262 (30.47/15.71)	GCDLATWHAYVSGFLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.24|      17|      20|     548|     565|       4
---------------------------------------------------------------------------
  548-  565 (26.57/24.32)	PGwSSFMKGASLTPVMVN
  571-  587 (26.67/16.75)	PA.SSFTEIEKVFEIAVN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.49|      13|      24|    1029|    1041|       5
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 1029- 1041 (23.34/15.50)	SNDAVIQLLRSCF
 1055- 1067 (24.16/16.33)	SNGGIGALLGHGF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.37|      16|      19|     478|     494|       6
---------------------------------------------------------------------------
  478-  494 (28.06/21.22)	M.MFI..SGiNVSSTYFE.CI
  497-  516 (19.32/ 8.97)	MdMPIncSG.NLHHLIVEaCI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      28.68|       9|      20|     657|     668|       8
---------------------------------------------------------------------------
  657-  668 ( 9.13/12.62)	CvQIFSlhGLVP
  678-  686 (19.55/ 9.11)	C.EVFG..SCVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.09|      19|      69|     762|     780|       9
---------------------------------------------------------------------------
  762-  780 (36.31/17.41)	SSSSPKPIFVDSF..PKLKVW
  830-  850 (31.78/14.43)	SSSSSGPGSEDRYlrPKLPAW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     152.39|      47|     803|     162|     215|      10
---------------------------------------------------------------------------
  162-  215 (76.44/64.56)	FSIAWQLVDAT...LDDEG..LLQLTEHEPkWPVKPQddmdvdCHNMYEEKKKEYQERL
  966- 1017 (75.95/46.88)	LTITYKLDKASqrfLDLAGpaLESLAAGCP.WPCMPI......VASLWTQKAKRWSDFL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16353 with Med33 domain of Kingdom Viridiplantae
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