<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16347

Description Serine/threonine protein kinase
SequenceMMTSQKGNGEKKQEMVAVAIDKDKGSQSALKWAVDHLLGKGKSVTLLHVKHKTSSASTPLGGHVGFSENEGKVPVDNQTKELFLPFRCFCTRKDIQVTEVVLEDTDIARAICDYVKNNLIENLVVGATAKNGFVRFKTLDIPGSISKGAPEFCTVYVISKGMTASVRSALAPLPKESAPRSLQNANNPTSAPTDARLMQGNGTRGPSTSPFAAKTMSIEDMDSIKSPFTRGKATNRSFGELPDTDISFVSSNRPSNDRLIPSFDQDMIAAPRLSSSSDTENRLSFGSPFSNARSSDATNSFGVYSSSSQESGNFSWSGSQSLEEVEAEMRRLKQELKQTMDMYSTACREALTAKQKALELHRWKVEEQQRLEEARLAEEAALAIAEKEKEKCRVAIEKAEAAQRIAELEAQKRINAEMKALRESEEKKKVLDKLAQTDVRYRKYSIEEIETATEFFTESRKIGEGGYGPVYKCYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFRRGNTPVLPWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGVMLLQIITAKPPMGLTHHVERAIEKGTFAEMLDPAVPDWPVEEALAFTKLALKCTELRRKDRPDLGTVILPELDRLRTLAEESMPSFSLTISPRTSPNHSNSHSHVTETQKLYSGYDVSKGCSTAGYIQERSVETNIA
Length784
PositionTail
OrganismHandroanthus impetiginosus
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Bignoniaceae> Crescentiina> Tabebuia alliance> Handroanthus.
Aromaticity0.07
Grand average of hydropathy-0.427
Instability index45.36
Isoelectric point6.94
Molecular weight86821.70
Publications
PubMed=29253216

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein serine kinase activity	GO:0106310	IEA:UniProtKB-EC
protein threonine kinase activity	GO:0106311	IEA:UniProtKB-EC

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16347
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.83|      15|      15|     182|     196|       1
---------------------------------------------------------------------------
  182-  196 (24.57/11.79)	LQ..NANNPTSAPTDAR
  198-  214 (20.27/ 8.56)	MQgnGTRGPSTSPFAAK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      30.99|       9|      15|     276|     286|       2
---------------------------------------------------------------------------
  276-  286 (13.21/12.39)	SSDTENrlSFG
  294-  302 (17.78/ 8.84)	SSDATN..SFG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.63|      15|      17|     241|     255|       3
---------------------------------------------------------------------------
  241-  255 (26.14/19.68)	LPDTDISFVSSNRPS
  260-  274 (26.49/20.05)	IPSFDQDMIAAPRLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.17|      12|      17|     365|     377|       4
---------------------------------------------------------------------------
  365-  377 (14.51/12.62)	VEEQQRlEEARLA
  384-  395 (19.65/11.87)	IAEKEK.EKCRVA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.14|      14|      16|     124|     138|       5
---------------------------------------------------------------------------
  124-  138 (19.48/17.01)	VVGATAKnGFVRFKT
  141-  154 (26.66/17.83)	IPGSISK.GAPEFCT
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16347 with Med32 domain of Kingdom Viridiplantae
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