<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16339

Description Uncharacterized protein
SequenceMWTNIFKIGLRQISWFQFLPHELDFNKLPDKSVKVDQKDAATLAVLSAHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGQHSSVVEKAQPAFARLRVLASGLWVAPGDSEEVAAALSQALRNCLERALRGLSYVRFGDAFSKYHPFTQNEELFRRGQPVVEFVFAATEEAIFVHVIVSARHVRALSSSDVEPFLSSSSRRSNDRISVVVSPYGMRGKLTGCCPGDLVKQVYLSSGKFRGSNGTVGLPYHITQGSGLTGQLRGQNCYVEVTLGCHDKVVQKNVNSHGNFPQPHGTESPPVGRGTQSWPSDKLPVCEKTFVYPTEAVLVPVMQTSSAKSSLKRFWLQNWVGPSLSGSSLFMQCDDKADSRGGSSLEPSGTRSQHGYRSSSNSNSSSNCSISSSSSDSDQKTLGSGDLEADADSLMTRQSSLSSLGQMQNDGLQLGSKRPRTGTSESFGQAGMVLNPSMIDYGTMEVNNVSITGVADEQIVSQWGWDDDDRGVGMDIQALLSEFGDFGDFFENDALPFGEPPGGADSQALMFPASEGGEMVSSPSNSVMDVSDQMLLPVGFPNFDSFNHLQVPVSVEDFASKNQEVSKNSASGQVSCTLPSFSGEFDHVVKAEALMTFAPEYGAVETPKTEISSVIFRNPYVPKSCKVDSASSSNNYAYSATPPSSPCDGSDEKSVLPASMKACAERNESSSVLKSKKYYTHVERGNQQVGGSNNSFSKGEVGVASSQFSVISQTNVKSVSNKVSEGSLKEDNFLPSSRTVLATEIECLICQTSMCRLRHTLLSSNNLSPAGLSGLSGNSTPNQPHVDSSTMVDNISSKSELKKKEIIPVRIAGDMDGGVLDGPLSAPVGVWRSVGIPKVAKTSTSSMEVCPPIPHNSFIEDSMLSYGLRQPLLELLDGMALLVQQATSFVDVALDADCGDGPYGWLALQEQWRRGFSCGPSMVHAGCGGLLASCHSLDIAGGELVDPLSVDVQASLTISLLQSDMKAALRSAFHSVDGPLSVTDWCRGRSPSSEAGMTSDGLSAESTASASECRDSSSTVTLSVGEPMSPSLSSAGGVTSLKADGTRGDESGTSPSELDHQHSSRFRPTLSAVPFPSILVGVARAFLLWF
Length1129
PositionKinase
OrganismHandroanthus impetiginosus
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Bignoniaceae> Crescentiina> Tabebuia alliance> Handroanthus.
Aromaticity0.07
Grand average of hydropathy-0.258
Instability index49.43
Isoelectric point5.28
Molecular weight120756.61
Publications
PubMed=29253216

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16339
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.68|      26|      27|      89|     115|       1
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   85-  113 (37.08/29.96)	WLflPGQHSSVVEKAQPAFAR.L.RVLaSGL
  114-  142 (31.60/19.77)	WV.aPGDSEEVAAALSQALRNcLeRAL.RGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     413.76|     110|     151|     169|     317|       2
---------------------------------------------------------------------------
  169-  284 (174.02/92.68)	PVVEFVFAATEEAIFVHVI..VSARHV..RALSSSDVEPF....LSSSS......RRSNDRI..SVVVSPYGMRGKLTgccPGDLVKQVYLSSGKFRGS..NGTVGLPYHITQGSGLTGQLRGQNCYVEVtlgC
  323-  418 (123.15/92.77)	PVCEKTFVYPTEAVLVPVMqtSSAKSSlkRFWLQNWVGPS....LSGSSlfmqcdDKADSRG..GSSLEPSGTRS...........QHGYRSS.....S..NSNSSSNCSISSSSSDSDQ..............
  793-  889 (116.59/49.36)	..................M..CRLRHT...LLSSNNLSPAglsgLSGNS......TPNQPHVdsSTMVDNISSKSELK...KKEII.PVRI.AGDMDGGvlDGPLSAPVGVWRSVGIPKVAKTSTSSMEV...C
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     125.11|      27|     629|     439|     465|       3
---------------------------------------------------------------------------
  439-  465 (47.34/25.92)	SLSSLGQMQNDGLQL.GS....KRPRTGTSES
 1029- 1059 (39.96/20.60)	SPSSEAGMTSDGLSA.EStasaSECRDSSSTV
 1070- 1095 (37.81/19.05)	SLSSAGGVTS..LKAdGT....RGDESGTSPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.00|      11|     250|     299|     309|       4
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  299-  309 (24.81/13.05)	FPQPHGTE..SPP
  550-  562 (17.19/ 6.58)	FPASEGGEmvSSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.05|      30|     301|     681|     711|       5
---------------------------------------------------------------------------
  681-  711 (49.22/32.47)	PPSSPCDGSDEKSVLPASMKAcAERNESSSV
  986- 1015 (49.84/27.60)	PLSVDVQASLTISLLQSDMKA.ALRSAFHSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     114.42|      36|     148|     577|     614|       8
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  577-  614 (54.25/44.17)	VGFPNfDSFNHLQVPVSVEDFASKNQEVSKnSASGQVS
  728-  763 (60.17/38.54)	VGGSN.NSFSKGEVGVASSQFSVISQTNVK.SVSNKVS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16339 with Med13 domain of Kingdom Viridiplantae
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