<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16321

Description Transporter
SequenceMDNNLLVSDPMRVYRAKRDAARKRVTDKYAILGFISSGTYGRVYKAQSKDVDGRIHAIKKFKPDKEGDVITYTGISQSAIREIALNREITHENIVALKEVILEDKSIYMVFEYAEHDFLQVIHHHSQTLRSQISLAVLKSLTYQLLNGLLYLHDAHIIHRDLKPANILITSSGVVKIGDLGLARLTHQPLQPLFAGDKVVVTIWYRAPELLLGAKHYNKSIDIWAVGCVMAELASLRPIFKGEEAKLDSKKNVPFQKDQLLKIFEVLGTPSEREWPKIKDLPEYQCMRRLDHYSNRLQEWSQSRVRSHEGANLLKELFAYDPDRRLTAGEALQHKWFQEDPLPSRNAFESLSTQQVPPHRRITQDDAPSMMPVAAVGSQVQGQGQVSHMQATGQAHLSQQLSHSHSNHSGKAGSAASFASVSGGGGGPSRKKARLG
Length436
PositionKinase
OrganismGanoderma sinense ZZ0214-1
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Polyporales> Polyporaceae> Ganoderma.
Aromaticity0.07
Grand average of hydropathy-0.416
Instability index44.01
Isoelectric point9.38
Molecular weight48871.22
Publications
PubMed=26046933

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16321
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      79.97|      22|      23|     254|     275|       1
---------------------------------------------------------------------------
  236-  258 (22.67/12.95)	.LRPIFK..GEEakldSKK..NVPFQKD
  259-  280 (40.48/28.59)	QLLKIFEVLGTP....SER..EWPKIKD
  285-  300 (16.81/ 7.80)	QCMR...RLDHY....SNRlqEW.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.57|      20|      27|      12|      34|       2
---------------------------------------------------------------------------
   12-   34 (29.45/27.23)	RVYRAKRDAARKRVtdkYAILGF
   42-   61 (35.12/23.15)	RVYKAQSKDVDGRI...HAIKKF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.46|      11|      23|     334|     344|       3
---------------------------------------------------------------------------
  334-  344 (23.01/14.68)	HKWFQEDPLPS
  359-  369 (20.46/12.34)	HRRITQDDAPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.76|      15|      29|     148|     175|       4
---------------------------------------------------------------------------
  148-  164 (23.29/31.40)	GLLYLhdAHIIHRDLKP
  178-  192 (28.47/ 8.64)	GDLGL..ARLTHQPLQP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16321 with CDK8 domain of Kingdom Fungi
Unable to open file!