<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16164

Description Uncharacterized protein
SequenceMDILNNREEPALSSPSSLTVVVAVDKSKNSLRAIKWTLEKFLLGERTRFKLLHVCAQITTIPTPMGNYPISQVRDDVAAAYKKEVEWKTNKMLLPYKQMFTAKKVEVEVLVIEADDVAEAIARQVSKLKSTKLVIGASSRRRFQWAMKSKDLSSKISECAPKFCTVYAIRKGKLSSVRPSHFETVGSVKSDSNDADTSTTNSSSNNFSSQIDDTDQGSTASYSQLHLRSLGIQHLHAPPTRNQGHHKSRSVLTNIGHSNLDSSYSNMSDGDGLSTGVRISSFRSLQADLLTQDFDQASTSDAPTNSSSEIKVDLDFELEKLKIEIRHARGMYAVAQTEKINAARQLNNLSKQRTEEALKFQEISLREEQARELAKQEMEKHEAAKREAEFLRECTEKEASDRKEVEYRAARDANEKQKLQKMLESPNEPYKKFTWEEIVSATSSFSDDLRIGMGAYGTVYKCTLNHVTAAVKVLHSKEGQGTKEFQQELDILSKIRHPHLLLLLGACPDHSCLVYEFMENGSLEERLLQKNDASPIPWFVRYRIAWEIASALVFLHNSKPMPIVHRDLKPANILLDQNLVSKIGDVGVSTLLPSIDCSQSLFYQESSLVGTLCYIDPEYQRSGLVSPKSDVYAFGIVVLQLLTAKPALALAHIVETALENGHFMEILDSRAGSWPIKETNELASLALRCAEMKLRDRPDLSAEVFPVLERLKGIADKASAASVHPSPPNDFICPLLKDLMEDPCVAGDGYTYDRKAIEVWLKENDKSPLTGLPLPSKSLIPNYSLFSAIMEWRSKRQ
Length797
PositionTail
OrganismAquilegia coerulea (Rocky mountain columbine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Ranunculales> Ranunculaceae> Thalictroideae> Aquilegia.
Aromaticity0.07
Grand average of hydropathy-0.399
Instability index43.67
Isoelectric point6.73
Molecular weight89185.50
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16164
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.20|      36|     139|     501|     536|       1
---------------------------------------------------------------------------
  501-  536 (63.39/42.32)	LLLLGACPDHSC..LVYEFMENGSLEERLLQKNDASPI
  639-  676 (55.80/36.40)	LQLLTAKPALALahIVETALENGHFMEILDSRAGSWPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.32|      37|      39|     338|     376|       3
---------------------------------------------------------------------------
  338-  376 (55.07/44.21)	EKINAARQLNNLSKQRTE.EALKFQEISLReeQAREL.AKQ
  379-  417 (53.25/36.16)	EKHEAAKREAEFLRECTEkEASDRKEVEYR..AARDAnEKQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.91|      20|      39|      75|      94|       4
---------------------------------------------------------------------------
   75-   94 (34.86/26.28)	DDVAAAYKKEV.EWKTNKMLL
  115-  135 (27.05/18.69)	DDVAEAIARQVsKLKSTKLVI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.73|      16|      21|     155|     170|       5
---------------------------------------------------------------------------
  155-  170 (30.24/22.61)	KISECAP.KFCTVYAIR
  173-  189 (23.49/15.86)	KLSSVRPsHFETVGSVK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.79|      21|      21|     255|     275|       6
---------------------------------------------------------------------------
  255-  275 (36.83/23.16)	IGHSNLDSSYSNM..SDGDGLST
  277-  299 (29.97/17.56)	VRISSFRSLQADLltQDFDQAST
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16164 with Med32 domain of Kingdom Viridiplantae
Unable to open file!