<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16161

Description Uncharacterized protein
SequenceMETSELTRFEDRVLETVKLCQDRKDSPLTWGMEVCKCLREVGLGIPSPELGQVLISNLCFINNNPYFWKFIEQAISSGLLSSLQVLALLSSRVIPHRRSQPEAYRLYLELVVRYAFSPTRMDDFCKKKITKSVDDALQLTKTYEVHIAESGHAFALFLFSIIVGLIDSTLEDWKLQLSSTDKLNGMFKDSDHQAMDVDSKVDHTDIRLELRERLHKTNSMRAIEVLGELTENKRAVVLLRLVLLNMPEKFNGLLQRLQFLEANRVASSNIKSASQVLARLFGNIQRIRGLENHLNKRHLINVLFNTGPCSSVSCSDFGTTQAACWLPFDIYMETAMDGRQLPATSAIDILAELIKTLQVNNRASWQHTFQALWISALRLVQRERDPLEGPIPHLDARLCILLSITPLAIVRLVDEEEMPSLSLEEGSNVRSHNEQGVAGCVQGTRRLGLITSLQALRQFSGLLSPPASVIIAANNAAAKAAAFVSNFKNGNEGLTEHVKNDLHTKSVGSMLHLIVEACITRKLIDTSTYFMPGYVSISVSSPPDSSLDQGAPWSAFMEGAHLAGSLKSSLIATPASSLVEIEKLYHIAINGSEEERSAAAKILCGASLIRGWNIQEHVVHFVVKLLSPPVPTNFTGPESHLVYYTPMLNTILFGMSSIDIVHVLSLHGVIPEVAASLMPLCEAFGSLVPTSSHKSSTSDEPSVYTVFSCAFLFLLRLWKFYRPPHEHCITEGGGYTGSELTLEYLLLLHNSRIASQNSSAAGDNVTNTLESSMSQAVYIDSFPKLRAWYCQNKACVASTLSGLSSGNPVHQLANKILNMIYRKMSKGGTMSSNFSAQSGSSISGSPVSTGEDAYERPMLPSWELLEAIPFVLEAVLTACAHGRLSSKDLTTGMRDLVDFLPASLAAILSYFSAEITRGIWKPVSMNGTDWPSPAATLLSVENEIKEILAAAGVTVCSPSAGVGPVMLPLPVAALVSLTITFKLDKGLEYIHGVAGPALENCASSCRWPSMPIIGALWAQKVRRWHDFIVLSCSRSAFKQNQEAVAQLLRSCFTSFLGSPNDINSSMSSPMGVNALLGTITISTRGLRPSIAPGLLFLRSCREIQNVQFVNNIIVELVVESARASAARWGNGNSARLKSNQTSLASAAALAKEVAMLGASLLCVAGGVQLVQVLYQETIPTWLLSTNNLQKSVPISCILEGYGMAYLLFLSGSFIWGVGQRSYTRSFARRARILSVHMDFVAGALDGNISLGCDPATWKAYVSCYVGLLVTFAPAWIRELKLETLTKLAHGLRGWHECELALSLLERGGYASMGFVAESLM
Length1320
PositionTail
OrganismAquilegia coerulea (Rocky mountain columbine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Ranunculales> Ranunculaceae> Thalictroideae> Aquilegia.
Aromaticity0.07
Grand average of hydropathy0.128
Instability index46.61
Isoelectric point6.90
Molecular weight144257.75
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16161
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     237.18|      78|     117|     418|     498|       1
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  418-  498 (123.25/85.81)	MPS.LSLEEGSNVRSHNEQGV..AGCVQGTRRLG.LITSLQAlRQFSGLLSPPASVIIAAN......NAAAKAAAFVSNFKNGNegLTEHV
  531-  618 (113.93/69.46)	MPGyVSISVSSPPDSSLDQGApwSAFMEGAHLAGsLKSSLIA.TPASSLVEIEKLYHIAINgseeerSAAAKILCGASLIRGWN..IQEHV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     205.78|      48|      75|     832|     879|       2
---------------------------------------------------------------------------
  832-  879 (80.91/43.89)	SNFSAQSGSSISGSPVSTGEDAYERPMLPSWEL...LEAIPFVLEAV.LTAC
  909-  956 (72.23/38.43)	SYFSAEITRGIW.KPVSMNGTDWPSPAATLLSV...ENEIKEILAAAgVTVC
  959- 1001 (52.64/26.12)	...SAGVGPVMLPLPV.....AALVSLTITFKLdkgLEYIHGVAGPA.LENC
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.90|      19|     459|     728|     753|      10
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  728-  753 (30.11/33.14)	CITEGGGytgseltLEYLLLLHNSRI
 1196- 1214 (37.78/23.23)	CILEGYG.......MAYLLFLSGSFI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     152.73|      51|     123|     205|     264|      11
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  205-  264 (77.06/77.35)	DIRLELRERLHKTNSMRAIEVLGELTE....NKRAvvllrlvllNMPEKFNGL.LQRLQFLEANR
  329-  384 (75.67/57.28)	DIYMETAMDGRQLPATSAIDILAELIKtlqvNNRA.........SWQHTFQALwISALRLVQRER
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16161 with Med33 domain of Kingdom Viridiplantae
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