<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16160

Description Uncharacterized protein
SequenceMETSELTRFEDRVLETVKLCQDRKDSPLTWGMEVCKCLREVGLGIPSPELGQVLISNLCFINNNPYFWKFIEQAISSGLLSSLQVLALLSSRVIPHRRSQPEAYRLYLELVVRYAFSPTRMDDFCKKKITKSVDDALQLTKTYEVHIAESGHAFALFLFSIIVGLIDSTLEDWKLQLSSTDKLNGMFKDSDHQAMDVDSKVDHTDIRLELRERLHKTNSMRAIEVLGELTENKRAVVLLRLVLLNMPEKFNGLLQRLQFLEANRVASSNIKSASQVLARLFGNIQRIRGLENHLNKRHLINVLFNTGPCSSVSCSDFGTTQAACWLPFDIYMETAMDGRQLPATSAIDILAELIKTLQVNNRASWQHTFQALWISALRLVQRERDPLEGPIPHLDARLCILLSITPLAIVRLVDEEEMPSLSLEEGSNVRSHNEQGVAGCVQGTRRLGLITSLQALRQFSGLLSPPASVIIAANNAAAKAAAFVSNFKNGNEGLTEHVKNDLHTKSVGSMLHLIVEACITRKLIDTSTYFMPGYVSISVSSPPDSSLDQGAPWSAFMEGAHLAGSLKSSLIATPASSLVEIEKLYHIAINGSEEERSAAAKILCGASLIRGWNIQEHVVHFVVKLLSPPVPTNFTGPESHLVYYTPMLNTILFGMSSIDIVHVLSLHGVIPEVAASLMPLCEAFGSLVPTSSHKSSTSDEPSVYTVFSCAFLFLLRLWKFYRPPHEHCITEGGGYTGSELTLEYLLLLHNSRIASQNSSAAGDNVTNTLESSMSQAVYIDSFPKLRAWYCQNKACVASTLSGLSSGNPVHQLANKILNMIYRKMSKGGTMSSNFSAQSGSSISGSPVSTGEDAYERPMLPSWELLEAIPFVLEAVLTACAHGRLSSKDLTTGMRDLVDFLPASLAAILSYFSAEITRGIWKPVSMNGTDWPSPAATLLSVENEIKEILAAAGVTVCSPSAGTFYSSLLSFKSFIRNLPLWHVKAVF
Length986
PositionTail
OrganismAquilegia coerulea (Rocky mountain columbine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Ranunculales> Ranunculaceae> Thalictroideae> Aquilegia.
Aromaticity0.08
Grand average of hydropathy0.055
Instability index46.42
Isoelectric point6.35
Molecular weight108456.44
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16160
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.59|      29|     294|     502|     554|       2
---------------------------------------------------------------------------
  519-  554 (39.18/65.70)	ITRKLidtSTyfmPGYVSISVSSPPDSSLdQGAPWS
  820-  848 (52.40/22.89)	IYRKM...SK...GGTMSSNFSAQSGSSI.SGSPVS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.72|      20|     294|     259|     292|       3
---------------------------------------------------------------------------
   70-   89 (32.60/10.91)	FIE..QAISSGLLSSLQVLALL
  259-  280 (28.13/37.48)	FLEanRVASSNIKSASQVLARL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     204.75|      77|     165|     387|     466|       4
---------------------------------------------------------------------------
  387-  437 (70.33/36.74)	.....................................................................................................................LEGPIPHL...DARL.CILLSITPLAIVRLVDEEEMPSLSLEEGSNVRSHNEQGV
  440-  466 (16.67/ 9.50)	CVQGTRRlGLITSLQALRQFSGLLSPP.................................................................................................................................................
  557-  603 (56.88/28.18)	...........................asviiaannaaakaaafvsnfkngnegltehvkndlhtksvgsmlhliveacitrklidtstyfmpgyvsisvssppdssldqgapwsafMEG..AHL...AGSL.KSSLIATPAS..SLVEIEKLYHIAINGSEEERSAAAKIL
  604-  662 (60.87/28.43)	CGASLIR.GWNIQEHVVHFVVKLLSPP......................................................................................vptnFTGPESHLvyyTPMLnTILFGMSSIDIVH..........................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.13|      19|      32|     166|     186|       8
---------------------------------------------------------------------------
  166-  186 (29.72/27.76)	IDSTleDWKLQL.SSTDKLNGM
  201-  220 (29.40/19.96)	VDHT..DIRLELrERLHKTNSM
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16160 with Med33 domain of Kingdom Viridiplantae
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