<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16130

Description Uncharacterized protein
SequenceMDNNNWRPAQAGGVAAAGEPNNNNNTSMGVEGPDWRSQLQADSRQRIVNKIMDTLKRHLPISGPEGLLELKKIAVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQNNGVTNSLPQNPVASNQNPPDPASHSMQSQVLNQGHSSISLPNQPQARQQLLSQNIQNTTASGGIQSSSGLQSAFPSVTGLTPSTMPNAIGQNSTLQNISGISQNSVGQGVPSNIFSNTQRQMQGRQHPQQVVSQPNQQQPTNSQQYMYQQHQNQMMKQKLQQGNIQPSLMQSHIQPQQNLLQSTQLQPSQQSLMQMSSSLQGNQSTQQTQPSMMQSASHSGFQQNQQPSVQQSTASVLQQHTQSVLRQQPQSQQSLHQQSTGLHQQQPSIPQQQQTLAGQQQNATNIQQQKNQQLIGQQNSVTDLQQSQQQQQRLLGQQNNLSNMQQQLLGQQNNISSMNQQQIGSQNGVGLQPQQLLGTQSSVSNMQSHQQSMHLLSQQAKVGGQQQQSTQASLMQIPGQQSQSQPLQPQLMPQLQSQPAQFQQQLGLQHQPNQLQRDMQQRLNSSVIQPPNVAEQKQIQSQRVLPEASSTSMDSTSQTGQANTADWQEEAYQKIKAMKEMYLPDLLEMHHKLSVKFQQHETVAQQPKDQMDKLRLMKIYLERIITFLQVSKNNIPLTHRDKLPGYEKQIISFLNSNRTKKPVPANQQQLQPSGGHTLSMPQQQQPQSQIPQLQQHDNQMNSQMQPMNVPNSVTPEQQTAGTNMSHSSLPLSNHMGVSPMQGMNSLQSGSALEMGQGSVPSSLQHGGMGSRQQNSVNAPSQANMNTLPQGGVNGLQPNINSLQLTSNMLQQQHLKQQQEQQLLQSQQMKQQQQQQLQRQMHQQMLQQQKQQVQQQHQQHPQMQQQQQQQQLQQQQQQKQQLPAQFQAHQMPQLHQMSEDLKMRQAMGFKQGMAPQHHSAGQRAPYHHQQLKPGAQFPISSPQILSAASPQISQHSHSSPQIDQQSLLTFSKSGTPLQSANSPFIVPSPSTPLAPSPLPGDPEKQASGVSSLSNAGNIGHPQTSTALSQAQSLAIGTPGISASPLLAEFIGTDSNQGTEQPLERLVKAVKSISTKAFSASVSDIGSVISMIDRIAGSAPGNGSRAAVGEDLVAMTKCRMQARNFITQDGVSATKKMRRDTSAMPLNGFSSAGSVTDSFKQRNGLEMSDLESTATSRIKRPRIEANPALLEEIKEINLRLIDTVVEISDEDIDPVTVAAAAEGGQGTLVKCSYTAVALSPNLKAQYASGQMLLIPTNYPNCSPVLLDKLPVDLSKEYDDLSLKTRSRFSISLRSLSQPMSLKEMAKAWDLCARAVIAEYAQKSGGGTFSSRYGTWKKCVSAA
Length1369
PositionTail
OrganismAquilegia coerulea (Rocky mountain columbine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Ranunculales> Ranunculaceae> Thalictroideae> Aquilegia.
Aromaticity0.03
Grand average of hydropathy-0.798
Instability index73.28
Isoelectric point9.52
Molecular weight150578.70
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16130
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     161.97|      30|      30|     435|     464|       3
---------------------------------------------------------------------------
  438-  464 (44.78/ 9.31)	LGQQNNISSMNQQQIGSQNGVGLQPQQ....
  521-  547 (38.39/ 6.64)	MPQLQSQPAQFQQQLGLQH....QPNQlQRD
  838-  865 (40.92/ 7.70)	LQQQHLKQQQEQQLLQSQ.QMKQQ.QQ.QQL
  891-  918 (37.88/ 6.43)	MQQQQQQQQLQQQQQQKQ.QLPAQFQA.HQ.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.94|      20|      21|     259|     279|       7
---------------------------------------------------------------------------
  693-  713 (26.13/ 7.18)	PANQQqLQPSGGHTLSMPQQQ
  728-  747 (29.81/ 6.17)	QMNSQ.MQPMNVPNSVTPEQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     145.71|      28|      30|     209|     238|       8
---------------------------------------------------------------------------
  198-  227 (34.12/ 9.79)	GQNSTLQNISGI.SQNSVGQGVPSNIFsnTQ
  228-  251 (37.65/ 7.41)	RQMQGRQHPQQVvSQPN.QQQ.PTN.....S
  252-  275 (37.75/ 7.45)	QQYMYQQHQNQM.MKQKLQQG...NI...QP
  770-  794 (36.19/ 6.79)	QGMNSLQSGSAL.EM...GQGSVPSSL..QH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      97.68|      29|      35|    1007|    1035|       9
---------------------------------------------------------------------------
 1007- 1027 (32.71/10.32)	...........S.ANSPFI.VPSPSTPL..APSPLP
 1028- 1063 (27.45/ 7.55)	GDPEKQASgvsSlSNAGNIgHPQTSTALsqAQSLAI
 1064- 1090 (37.52/12.86)	GTPGISAS...P.LLAEFI..GTDSNQG..TEQPL.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     136.35|      33|      36|     114|     146|      10
---------------------------------------------------------------------------
  107-  138 (52.60/14.45)	QNNGVT.NSLPQNPVASN....QNPPD.PASHSMQSQV
  139-  176 (41.22/ 9.37)	LNQGHSSISLPNQPQARQqllsQNIQNtTASGGIQSSS
  465-  493 (42.53/ 9.96)	LLGTQSSVSNMQSHQQSM....HLLSQ.QAKVG....G
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      61.91|      20|      21|    1132|    1152|      11
---------------------------------------------------------------------------
 1132- 1152 (30.06/28.23)	RAAvGEDLVAMTK......CRMQARNF
 1154- 1176 (15.58/ 6.72)	....TQDGVSATKkmrrdtSAMPLNGF
 1177- 1190 (16.27/ 7.85)	SSA.G....SVTD......SFKQ.RN.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.93|      18|      21|     795|     813|      13
---------------------------------------------------------------------------
  795-  813 (29.36/18.36)	GGMGSRQQNsVNA.PSQANM
  819-  837 (28.57/13.16)	GGVNGLQPN.INSlQLTSNM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.57|      22|      36|     590|     612|      15
---------------------------------------------------------------------------
  590-  612 (35.44/33.71)	QANT.ADWQEEAYQKIKAMKeMYL
  628-  650 (35.14/26.96)	QHETvAQQPKDQMDKLRLMK.IYL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.82|      16|      16|    1295|    1310|      16
---------------------------------------------------------------------------
 1295- 1310 (25.68/16.50)	KLPVDLSKEYDDLSLK
 1314- 1329 (26.14/16.96)	RFSISLRSLSQPMSLK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.43|      13|      19|      70|      86|      21
---------------------------------------------------------------------------
   70-   86 (15.33/23.22)	LKKIAVrfeeKIYTAAT
   92-  104 (22.09/16.49)	LRKISL....KMLTMET
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16130 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MDNNNWRPAQAGGVAAAGEPNNNNNTSMGVEGPDWRSQLQADSRQRIVNKIMDTLK
2) METKSQNNGVTNSLPQNPVASNQNPPDPASHSMQSQVLNQGHSSISLPNQPQARQQLLSQNIQNTTASGGIQSSSGLQSAFPSVTGLTPSTMPNAIGQNSTLQNISGISQNSVGQGVPSNIFSNTQRQMQGRQHPQQVVSQPNQQQPTNSQQYMYQQHQNQMMKQKLQQGNIQPSLMQSHIQPQQNLLQSTQLQPSQQSLMQMSSSLQGNQSTQQTQPSMMQSASHSGFQQNQQPSVQQSTASVLQQHTQSVLRQQPQSQQSLHQQSTGLHQQQPSIPQQQQTLAGQQQNATNIQQQKNQQLIGQQNSVTD
3) QQSQQQQQRLLGQQNNLSNMQQQLLGQQNNISSMNQQQIGSQNGVGLQPQQLLGTQSSVSNMQSHQQSMHLLSQQAKVGGQQQQSTQASLMQIPGQQSQSQPLQPQLMPQLQSQPAQFQQQLGLQHQPNQLQRDMQQRLNSSVIQPPNVAEQKQIQSQRVLPEASSTSMDSTSQTGQANTADWQEE
4) QSANSPFIVPSPSTPLAPSPLPGDPEKQASGVSSLSNAGNIGHPQTSTALSQAQSL
5) YEKQIISFLNSNRTKKPVPANQQQLQPSGGHTLSMPQQQQPQSQIPQLQQHDNQMNSQMQPMNVPNSVTPEQQTAGTNMSHSSLPLSNHMGVSPMQGMNSLQSGSALEMGQGSVPSSLQHGGMGSRQQNSVNAPSQANMNTLPQGGVNGLQPNINSLQLTSNMLQQQHLKQQQEQQLLQSQQMKQQQQQQLQRQMHQQMLQQQKQQVQQQHQQHPQMQQQQQQQQLQQQQQQKQQLPAQFQAHQMPQLHQMSEDLKMRQAMGFKQGMAPQHHSAGQRAPYHHQQLKPGAQFPISSPQILSAASPQISQHSHSSPQIDQQSLLTFSKSG
1
102
414
1006
675
56
412
599
1061
1002










Molecular Recognition Features






MoRF SequenceStartStop




NANANA