<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16117

Description Uncharacterized protein
SequenceMAIGVQSHDFGGGGVVNSLMGSTTRGEIEEEIVEISREVAVEEKLYVAVSKDVKGCKPNVLWAVKHSEGRKICLLHVHQPAQMIPLSMGGKFPANKLTELQVRAHRVLEKQKMHKMLNEYIFICAQLGVRAEKLFIDMENIDKGIVELIAQHGIKRLIMGAAIDKRTSMLKSKKAIFVNQEAPISCHIWFVCKGSLIQTREGSLEGMEIRITDSPLASPLTETSHGDCLRSRSISEGQSQHVKLTSPVQNFLNRLRSHGRRVATVPSLDVNKGVLLPQHQLGAEESVNAWEGMSQGSVLSTWSSSEEQIGSLESNSEVRDEASEDDSLLSSIHESEEDARRTSPTHELDPGTLDRELIDLLQQAMAEAENSKREAFDELVKRRRAEKDVIEAIRRVKESESLYANKVKRKKEMEVVLARETSELNKINSQKDKVMEELKTALDQKMALESQLADSGRMLEEFKEKMAVAVELLQTFKQQRDSLQFERDSAVNEAEELRKKRDTEASSSQSQQIFSEFSFSEIDAATVNFDPRLVIGQGGYGSVYKGVLRNTEVAIKLLNSSSKQGRSEFQQEVDVLSKMRHPNLLTLIGTCPEAWALIYEYLPNGSVEDRLTCKDNTAPLSWQTRIRIAVEICSALIFLHYNKPHGIVHGDLKPSNILLDANFISKLGDFGICRSLSPDDISTYTTTLCSRTEHPKGTLLYMDPQFLSTGELTAKSDVYSFGIVLLQLLTGRPALGIAKEVQCALDEGTLNALLDCSAGDWPFVQAKQLAFLALRCCEMNRKNRPDLVSEVWRVLEPMKAACASSSSFRLGSEEPCQIPSYFICPIFQEIMREPRIAADGFTYEAEAIKGWLDGGHNTSPMTNLKLANCDLIPNHSLRSAIEEWRQQL
Length888
PositionTail
OrganismAquilegia coerulea (Rocky mountain columbine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Ranunculales> Ranunculaceae> Thalictroideae> Aquilegia.
Aromaticity0.06
Grand average of hydropathy-0.338
Instability index54.12
Isoelectric point5.75
Molecular weight99195.05
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16117
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     199.33|      69|      83|     196|     278|       1
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  196-  275 (93.12/93.87)	LiqTREGSL...EGMEIRITDSPLASplTETSHGDcLRSRS.ISEGQSQHVKLTSPVQNFlnrlRSHGRRvaTVPSLDVNKGVL
  281-  353 (106.21/63.47)	L..GAEESVnawEGMSQGSVLSTWSS..SEEQIGS.LESNSeVRDEASEDDSLLSSIHES....EEDARR..TSPTHELDPGTL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     229.52|      72|      83|     406|     488|       2
---------------------------------------------------------------------------
  356-  395 (38.21/16.55)	...............................ELI.DLLQ.QAMA.EAE......NSKReAFD..........ELVKRR.RAEKDVIEAIRR
  406-  488 (100.94/85.49)	KVKRKKEmevvlaretSELNkiNSQKDKVMEELK.TALD.QKMALESQL....ADSGR.MLEEFKEKMAVAVELLQTF.KQQRDSLQFERD
  496-  574 (90.37/56.40)	ELRKKRD.........TEAS..SSQSQQIFSEFSfSEIDaATVNFDPRLvigqGGYGS.VYKGVLRNTEVAIKLLNSSsKQGRSEFQQEVD
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.49|      23|     496|     123|     153|       3
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   99-  121 (39.13/27.44)	ELQVRAHRV.LEKQKMHKMLNEYI
  126-  149 (32.36/28.19)	QLGVRAEKLfIDMENIDKGIVELI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16117 with Med32 domain of Kingdom Viridiplantae
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