<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16077

Description Uncharacterized protein
SequenceMELIVQKTLWNNVLEFTKSAQNKGTEPLQWAIQLSTSLNSAGVSLPSVQLAHLLVSHICWENNVPITWKYLEKALTGHLVPPMLVLALLSSRVIPSRRSRPGAYRLYMELLKRYAYSFKSQIHGPNYESIMKSIDEVLHLSEIFGLQVSEPGVLVVEYAFSIVWQLLDATLDDEGLLELTPENNFKWASRSQDMEIDGDDSFNHKIPEHHERLLKANSVMAVELIAQFFQNKITSRLLCLAQKNLPTHWKRFIENIRLLGSNSSALRSSNLISPEVLLQLSSDMQKVFSRESRNSLQTQFRAVTAPVFLSCSAGQYHGDSRSAIWLPLDLFLEDATDGSQVAPTSAIEDLSGYIKSLRAVNGTSWHDTFLGLWFAAIRLVQRERDPIEGPVPRLDTRLCMLLSIIILALANIIEEEEVAQADEAEHHPSKQWNNKQVEGKRRKDLVSSLQILGDYEGLLTSPPSISSVANLAAAKAMMFVSGLTVGSGYFDCISMSDLPMNCSGNLRHLIVEACIARNLLDTSAYFWPGYVNGRINQIPHSIPSQVPGWSSLMKGASLTPAMVNTLVSTPASSLAELEKIYDIAVNGSDDEKISAATILCGASFIRGWNIQEYTVRFVTNLLSPPIPPDYSGSDSHLICIAPSLNTLLVGISSVDAVQILSLHGLVPQLAGALMEICEVFGSCVPNRSWNLPSGEEINAHVVFSHAFILLLRLWRFNHPPIEHVMGDVPPVWSQLTPEYLLLVRNSQVASKNSPKDQNRNRKLSTAAMPSSTQPIFVDSFPKLKVWYRQHQACIASTLSGLVHGTPVHQIVDGLLNMMFRKMNKSGGQTLTSGSSSSSGQGSDDVSLRPKLPAWEILEAVPFVVDAALTACSHGRLSPRELATGLKDLADFLPASLATIVSYFSAEVTRGIWKPAFMNGTDWPSPAAYLSTAEDQIKRILATTGVDVPSLAQGGTSPATLPLPLAAFVSLTITYKLDKASERFLNLAGPALESLSAGCPWPCMPIVASLWSQKVKRWSDFLVFSASRTVFHHNSDAVVQLLKSCFTATLGLSGSPITNNGGIGALLGHGFGSHFYGGFSPVAPGVLYLRVYGCIRDIMFMTEEILSILMLSVREIATNGQQKERTEKLKKSKYGTRYGQVSLAEAMKKVKLAASLGASLVWLSGGSGLVHSLIQETLPSWFLSAHGPEQEGGHVGMGAMLGGYALAYFAFMCGTFAWGVDSVSPGSKRRPRVIGAHFEFMASALDGKISLGCDWATWRAYVSGFVSLMVACTPVWLLEVDVDVLKRLSKGLRLWNEEDLALALLGRSGIGAMGAAAELIIGSE
Length1323
PositionTail
OrganismAquilegia coerulea (Rocky mountain columbine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Ranunculales> Ranunculaceae> Thalictroideae> Aquilegia.
Aromaticity0.08
Grand average of hydropathy0.084
Instability index45.07
Isoelectric point6.51
Molecular weight144546.66
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16077
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     500.06|     154|     252|     791|    1042|       1
---------------------------------------------------------------------------
  260-  362 (111.26/36.45)	GSNSSALRsSNLISPEVLLQLSSDMQKVF.....SRESRNSLQTQFRAVTA..PVFLSCSAGQYHGDSRSAIWLPldLFLeDATD.GSQVAPTSAIEDlsgYIKSLRAVNG..................................................................
  538-  644 (152.76/63.77)	....................................................IPHSIPSQVPGWSSLMKGASLTP..AMV.N.TLVSTPASSLAELE....KIYDI.AVNGSD.....DEKISAATI.LCGASFIR...GWNIQEYTVRFVtNLLSPPIPPDYSGSDSHLICIAPSL
  841- 1009 (236.04/266.69)	GSDDVSLR.PKLPAWEILEAVPFVVDAALtacshGRLSPRELATGLKDLADfLPASLATIVSYFSAEVTRGIWKP..AFM.NGTDWPSPAAYLSTAED...QIKRILATTGVDvpslaQGGTSPATLpLPLAAFVSltiTYKLDKASERFL.NLAGPALESLSAGCPWPCMPIVASL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.88|      37|     328|     366|     419|       2
---------------------------------------------------------------------------
  366-  402 (68.41/61.41)	HDTFLGLWFAAIRLVQRERDPIE...GPVPRLDTRLC..MLL
  700-  741 (60.48/28.30)	HVVFSHAFILLLRLWRFNHPPIEhvmGDVPPVWSQLTpeYLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     136.35|      41|     248|     791|     833|       5
---------------------------------------------------------------------------
  791-  833 (65.02/43.76)	QACIASTLsGLvHGTPV..HQIVDGLLNMMFRKMNKSGGQTLTSG
 1042- 1084 (71.33/40.04)	KSCFTATL.GL.SGSPItnNGGIGALLGHGFGSHFYGGFSPVAPG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16077 with Med33 domain of Kingdom Viridiplantae
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