<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16060

Description Uncharacterized protein
SequenceMEDRYSTKKKTTALFFLAIYLCGSMFAFALGKDDNPKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDGERLIGEAAKNQAPVNPERTIFDVKRLIGRKFDDKEVQKDMKLVPYKIVNRDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVITVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRRECERAKRALSNQHQVRVEIESLYDGLDFSEPLTRARFEELNNDLFKKTMGPVKKAMEDAGLEKTQIDEIVLVGGSTRIPKVQQLLKEYFNGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIKVFEGERSLTKDCRLLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVRAEDKASGKSEKITITNEKGRLTQEEIERMVREAEEFAEEDKKVKEKIDARNSLETYIYNMKNQVSDKDKLADKLDSDEKEKIETSVKETLEWLDENQNAEKEDYNEKLKEVEAVCNPIIAAVYQKSGGAAGAEGDDDDSHDEL
Length667
PositionUnknown
OrganismAquilegia coerulea (Rocky mountain columbine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Ranunculales> Ranunculaceae> Thalictroideae> Aquilegia.
Aromaticity0.06
Grand average of hydropathy-0.500
Instability index24.13
Isoelectric point5.20
Molecular weight73921.02
Publications









Function






Annotated function


GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16060
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.85|      17|      21|      70|      87|       1
---------------------------------------------------------------------------
   70-   87 (28.46/24.47)	NR..ITPSWVAFtDGERLIG
   92-  110 (26.40/17.01)	NQapVNPERTIF.DVKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.70|      23|      27|     577|     603|       2
---------------------------------------------------------------------------
  563-  588 (30.61/11.82)	EDKKVKEKIDA..rnsLETYIYNMKNQV
  590-  617 (29.09/19.58)	DKDKLADKLDSdekekIETSVKETLEWL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.30|      11|      27|     235|     245|       3
---------------------------------------------------------------------------
  235-  245 (20.46/12.52)	LGGGTFDVSIL
  263-  273 (21.85/13.88)	LGGEDFDQRIM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.72|      16|      16|     189|     204|       4
---------------------------------------------------------------------------
  189-  204 (27.29/15.98)	AQRQATKDAGVIA.GLN
  206-  222 (20.42/10.33)	ARIINEPTAAAIAyGLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     125.55|      39|     193|     280|     320|       5
---------------------------------------------------------------------------
  280-  320 (60.89/48.05)	IKKKHG.KDISKDNRALGKLrrECERAKRALSNQHQVRVEIE
  475-  514 (64.65/44.23)	IKVFEGeRSLTKDCRLLGKF..DLTGIPPAPRGTPQIEVTFE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     110.46|      34|     238|     382|     427|       6
---------------------------------------------------------------------------
  392-  427 (54.99/48.94)	KEPNKGVNPDEAVAYGAAvqGGILSGEG.GDETKDIL
  633-  667 (55.47/25.36)	KEVEAVCNPIIAAVYQKS..GGAAGAEGdDDDSHDEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.86|      17|      19|     138|     155|       7
---------------------------------------------------------------------------
  138-  155 (23.10/17.22)	IQVKIKDgETKVFSPEEI
  159-  175 (26.77/14.86)	ILTKMKE.TAEAFLGKKI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16060 with Med37 domain of Kingdom Viridiplantae
Unable to open file!