<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16021
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MQPILKADEQQPTSTQTNGYVKQVNGTPKSKLNQEKIVLPVEMASMISLKSLIGKLVHKSYADLLTLTDTLPSMSDVEKKRQILNYTTFVRKQFLKLLVLVKWADCADDIQMCQNIMAFLANQNKMFQDTVDYLHKIHIELPAARVRNFDIPTAVDVLTTGTYQRMPTKLKDMIHPPPFTDEEVLETFQQMNDTIRVRMLTEEVLPSPMQKYRIENGRIYFSIDNEFEVALTLMGQSHARRWWIVSLDILVQASSCEESASDLDISLSDAQKQHLRMNAQKQLIPPATAEGEENKATKLFFPLVNLYDYLHLCCLNMQLEMLHIQLLMLAKTKWLDQLKVQMDSSRAKLIITYWGGGSPAAHWARPQPEKEASKSTVLELSVSDEHEKESAKKNMAITVRDESKGLIQKAGIGASVRLAETDPADKPKIVSLLKYPKNCLDILWGDSKDLHTNAKLLNASDLNAEELLLHATKYHSHCIKDKLRQLLQSQKEFLEDNGLYLLENQKDNENPLVIRYRHEKYISIDIDSRTGKVKAYETKNESNEENVKLAGLEDRLNNDPENIAKHLLWLRSDIVIREIISLAKLLNLQPYHPSQMNLRAEDFIKLFGDVIPSNKTEKYPSHCVFLQFSQFDNWYFVIATIKNEFKSWLCCLNKIYDQNSIYQAVADLIYIDCDELRRKEAKKAVGSSKRQLEDDVEKASSQCDSKKRKLSRDLSVVVQHDYSDKFDSLIMDFQYLAQLDSLCRGYITNRKIELQLQIYKEALHYHKRPLLDTVLPVETQVKSHPVSYKMETICLPRQDLLRVCAYYYHPGDGKRKEKKTETIPWIEKLLPRMKNEILVRSFGWWNCGRGECYVVFQDRIDCERITLQEDDIEDHISLDKANNTISFTYANIDNCVDQFLNDWERIFMMINLSRQVHSVWFNKYKDQLTFQSTNLQKLLFIYAKQYTCTIHWTSSAKGRSRRYDIEFGVVGEPSNNKFNVLSASSNPHWKVLTQLRDILNEKRDLIYFVQILFHTLPELLEFVC |
Length | 1024 |
Position | Tail |
Organism | Rhizopus microsporus ATCC 52813 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina>
Mucoromycetes> Mucorales> Mucorineae> Rhizopodaceae> Rhizopus.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.425 |
Instability index | 45.72 |
Isoelectric point | 6.86 |
Molecular weight | 118879.28 |
Publications | PubMed=27956601
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP16021
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 165.17| 43| 164| 1| 43| 1
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1- 43 (71.46/45.85) MQPILKADEQQPTSTQTNGY..VKQVN.GTPKSKLNQEKIVLPVEM
129- 157 (27.06/12.81) ...............DTVDY..LHKIHiELPAARVRNFDIPTAVDV
166- 209 (66.66/42.28) MPTKLKDMIHPPPFTDEEVLetFQQMN.DTIRVRMLTEE.VLPSPM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 123.12| 38| 229| 441| 486| 2
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442- 479 (68.58/52.93) ILWGDS....KDLHTNAKLLNASDLNAEELLLHAT................KYHSHCI
567- 624 (54.54/24.35) LLWLRSdiviREIISLAKLLNLQPYHPSQMNLRAEdfiklfgdvipsnkteKYPSHCV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 261.66| 102| 586| 242| 385| 5
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257- 385 (147.21/205.88) EESA.SDLDISLSDAQKQHLrmnaQKQLIPPATAEGEENKATKlffP.LVNLYDYLHlCCLN.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................mqlemlhiqllmlaktkWLDQLKVQM...DSSRAKLIITYWGGGSPAAHWArpQPEKEASKSTVLELSVSDE
388- 441 (55.10/21.96) KESAkKNMAITVRDESKGLI....QKAGIGASVRLAETDPADK...PkIVSLLKYPK.NCLD.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
920- 972 (59.35/26.83) ..............................................................ilwgdskdlhtnakllnasdlnaeelllhatkyhshcikdklrqllqsqkeflednglyllenqkdnenplviryrhekyisididsrtgkvkayetknesneenvklagledrlnndpeniakhllwlrsdivireiislakllnlqpyhpsqmnlraedfiklfgdvipsnktekypshcvflqfsqfdnwyfviatiknefkswlcclnkiydqnsiyqavadliyidcdelrrkeakkavgsskrqleddvekassqcdskkrklsrdlsvvvqhdysdkfdslimdfqylaqldslcrgyitnrkielqlqiykealhyhkrplldtvlpvetqvkshpvsykmeticlprqdllrvcayyyhpgdgkrkekktetipwiekllprmkneilvrsfgwwncgrgecyvvfqdridceritlqeddiedhisldkanntisftyanidncvdqflndwerifmminlsrqvhsvWFNKYKDQLtfqSTNLQKLLFIYAKQYTCTIHWT..SSAKGRSRRYDIEFGVVGE
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