<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16015

Description Uncharacterized protein
SequenceMNHHGPPLNKLIAVAIDKDRGSQIALKWAVDNLLARGQTVILIHVKVKGSATNRLNQDASNDGSGMTELEPQLKELFLPFRVFCTRKDIQCYDVVLEDADVVKAIIEYINRTAIEVLILGAAAKGGLLRFKLKDIPGNVVKGVPDFCTVYVISKSGKISSTRSAARLAPFIHPLRHQFMQHANDRSNSIEDSNPPPRGSFSGVPKPVSDMTMSNLHSDTFNMKSPFTHRKGPNGKPYEISQPDTDISFVSSGRPSIDSMFPSFADSYDSGATPPRLSAFSDFEGQNFESMPMGRRSLDILPSELTFLSMEGDRTSISSTQDDVAAEMRRLKLELKQTMEMYSTACKEALTAQQKAMELQRWKAEEQRRIEEARIAEEAALALAEKEKAKSRAALEHAEAAQRLAELESQKRINAEMKALKEAEERNKVLNKYSNSDFRYRRYSIEEIETATEYFAQSNKIGEGGYGPVYKCYMDHTHVAVKVLRPDATHGRQQFQQEVEVLSCIRHPNMVLLLGACPEYGCLIYEFMSNGSLEDRLFQIGNTPPLSWQHRFRIAAEIGAGLLFLHQSKPEPIVHRDLKPANILLDRNLVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIIFLQILTAKPPMGLTHHVERAIEKGTFNDMLDPAVPDWPRDEALSLAKLSLRCSELRRKDRPDLSKVVMPELERLRTLGEETPCQTGFYSSGHSTIQSQASVSQASQHE
Length754
PositionTail
OrganismCapsicum chinense (Scotch bonnet) (Bonnet pepper)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
Aromaticity0.07
Grand average of hydropathy-0.406
Instability index45.88
Isoelectric point6.60
Molecular weight84267.07
Publications
PubMed=29089032

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16015
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     145.48|      50|      72|     325|     377|       1
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  325-  377 (78.15/59.90)	AEMRRLKLELKQTMEMYSTACKEaltAQQKAMELQRWKAEE..QRR..IEEARIAEE
  399-  452 (67.33/44.17)	AAQRLAELESQKRINAEMKALKE...AEERNKVLNKYSNSDfrYRRysIEEIETATE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     160.51|      37|      77|     187|     231|       2
---------------------------------------------------------------------------
  187-  223 (64.76/32.81)	NSIEDSNPPPRGSFSGVPKPVSDMTMSNLHSDTFNMK
  254-  287 (52.51/32.05)	PSIDSMFPSFADSYDSGATPPRLSAFSDFEGQNF...
  288-  317 (43.24/20.51)	....ESMPMGRRSLDILP...SELTFLSMEGDRTSIS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     189.89|      63|     392|     116|     185|       4
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  116-  185 (96.08/97.26)	VLILGAAAKGGLLRFKLKDiPGNvvkgVPDfcTVYVISKSGKIS...STRSAARLAP...FIH.....PLRHQFMQHAN...DR
  510-  586 (93.81/70.91)	VLLLGACPEYGCLIYEFMS.NGS....LED..RLFQIGNTPPLSwqhRFRIAAEIGAgllFLHqskpePIVHRDLKPANillDR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16015 with Med32 domain of Kingdom Viridiplantae
Unable to open file!