Description | Mediator of RNA polymerase II transcription subunit 19a |
Sequence | MDPDSKKFGRGPIELTGARDLISHFKLLPHYEFFGKRSLPLSISDTHYLHNVVGDTEIRKGEEMQLDQLTQGTSFSRETSSRIQPFDLDILGQAFQLRDTAPISLSPSDRGTPTIAGKSKSEMKDKEKKHKKHKDKDKEKDKEHKKHKHRHKDRGKDKDKEKKKDKSGHHDLGSEHSRKHEKKRKHDEEDLNGVHRHKKSKHKSSKIDEIGGIKVAG |
Length | 217 |
Position | Head |
Organism | Capsicum chinense (Scotch bonnet) (Bonnet pepper) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum. |
Aromaticity | 0.04 |
Grand average of hydropathy | -1.457 |
Instability index | 39.02 |
Isoelectric point | 9.66 |
Molecular weight | 24952.82 |
Publications | PubMed=29089032 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP15969 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 60.29| 17| 21| 133| 153| 1 --------------------------------------------------------------------------- 133- 153 (28.53/16.32) HKDKDKEKdkehKKHKHRHKD 155- 171 (31.75/10.16) GKDKDKEK....KKDKSGHHD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 48.45| 17| 19| 69| 87| 2 --------------------------------------------------------------------------- 69- 87 (26.15/23.43) LtqGTSFS.RETSS.RIQPFD 91- 109 (22.29/13.00) L..GQAFQlRDTAPiSLSPSD --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) KIDEIGGIKVA 2) MKDKEKKHKKHKDKDKEKDKEHKKHKHRHKDRGKDKDKEKKKDKSGHHDLGSEHSRKHEKKRKHDEEDLNGVHRHKKSKHK | 206 123 | 216 203 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab