<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15933

Description Uncharacterized protein
SequenceMHACMASQFPADDSIVLVAVDKDKNSSSAVKWAIDNLLINTNNLVLVHVRVKNSPKAASDSNGGSSDEAAQNVFTPFRAYSARKRIVVKEIVVENTDVTKGLIDYINNHCVTNVVLGASSRSALGRKYWTHDVPTMMNKAAPEFCTVYVVSKGKQQSVRPAVKPLPSPAPARQSSSSAWSPSRLSNSSDDSSRLTYTRAEQKIAESDKMRLSNGSIDNLHAPETTSSQRHTPQSDGSMRYARISPRSVDLTGENLDFTQVGIKDTAMNGNSAYAMDAEMKRLKLELRQTLDMYNAACKEAIMANQAADELNRWKMEEACKFEQARLAEEAALAIAETEKAKCRAAIEAAKRAQKLAEIEAQRRKYAELKAKRETERKKQAMNVRSENDVRYRKYTIEEIEVATKKFSASQKIGEGGYGPVFKGKLDHTPVAIKVLSPDAAQGKRQFQQEVEVLSLIRHPNLVLLLGACPEYGCLVYELMNNGSLEDRLFRKGNTPSIPWEIRFKIAAEIATGLLFLHQAKPEPLVHRDLKPGNILLDKNYVCKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGKLETKSDIYSLGVMLLQIITARPPMGLTHHVERAIEKDKFADFLDPTVPNWPVEEALTFAKLSLKCAELRKKDRPDLGSVIVPELNKLSEFGMSSMSSIAS
Length685
PositionTail
OrganismCapsicum chinense (Scotch bonnet) (Bonnet pepper)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
Aromaticity0.06
Grand average of hydropathy-0.403
Instability index46.46
Isoelectric point8.83
Molecular weight75886.83
Publications
PubMed=29089032

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15933
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.42|      28|     130|      54|      86|       1
---------------------------------------------------------------------------
   54-   86 (41.59/30.37)	SPKAASDSNGGSS....DEAAQNVftpfrAYSARKRI
  180-  211 (41.83/20.08)	SPSRLSNSSDDSSrltyTRAEQKI.....AESDKMRL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.56|      17|      21|     316|     336|       3
---------------------------------------------------------------------------
  296-  312 (29.07/13.65)	ACK..EAIMANQAADELNR
  318-  336 (24.50/24.07)	ACKfeQARLAEEAALAIAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.52|      26|      28|     340|     365|       4
---------------------------------------------------------------------------
  340-  365 (41.79/25.92)	AKCRAAIEAAKRAQKL...AEIEAQRRKY
  366-  394 (37.73/22.76)	AELKAKRETERKKQAMnvrSENDVRYRKY
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15933 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QSVRPAVKPLPSPAPARQSSSSAWSPSRLSNSSDDSSRLTYTRAEQKIAESDKMRLSNGSIDNLHAPETTSSQRHTPQSDGSMRYARISP
156
245










Molecular Recognition Features






MoRF SequenceStartStop




NANANA