<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15932

Description Uncharacterized protein
SequenceMWLPHNKGSPGNRRGNGNGVVALAIDKDKGSQYAIKWATDNLVNRGQTIVLIHVVTKPISSQYGNCGGVHVVDGNLSAHGQNLEKQTKELFLTFHCFCTRKDIRCLDIILEDSDVPKALTEYVSSAAIQSLVLGASRHGFIRRLKVTDIPSTVSKGAPDFCTVYVISKSKISSVKNASRPAPMASPLYKQIQQLEDHVNSSGFTPTARSRGIHSGSVVDRSQRRSFMTDESKKVGSPFDRRRGIPSRIFSDLSEADTDLSFVSSGRPSTDRTSSMMYDGMDSGRISQLSTSSDSSFGSERLGARGSELSSFNDFSSSSFETDDGEAEMRRLKMELQRTMDLYSTACKEALTAKQKSVELNLWRVEEEKRLEEARLAEEAAKVAAEKERDKCKVAMETAEAAQRLAELEAKRRVDAEMQAHKEAEEKEKAMMNLGIGDFRYRRYNIEEIEEATQFFSDSLKVGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGRSQFQQEVEVLSRMRHPNMVLLLGACPEYGCLVYEYMANGSLEERLMRRADKHALSWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDHNFVTKISDVGLSRLIPPSTAEEVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGILLLQLITAKPAMGITHYVSRCIEKGDLKEVLDPSLSDWPIEETLNFAKLALNCAELRRKDRPDLGKVVLPELNRLRALAEENMGHLVMGGSACPSPSHSQACTSQASWIKRDRDREKDSASKGKNWASAEKADQPHVGMDELLAVLGYKMKSSDMAEVAQKLEQLEMAMGTSMEDGISHLSTDALHKNSSNLSG
Length840
PositionTail
OrganismCapsicum chinense (Scotch bonnet) (Bonnet pepper)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
Aromaticity0.06
Grand average of hydropathy-0.458
Instability index47.57
Isoelectric point6.63
Molecular weight93192.70
Publications
PubMed=29089032

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15932
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.35|      31|     225|     485|     518|       1
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  485-  518 (49.64/45.63)	RPDaaQGRSQFqQEVEVLSRMRHPNM.VLLLG..ACP
  707-  740 (47.72/32.32)	RPD..LGKVVL.PELNRLRALAEENMgHLVMGgsACP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     106.97|      23|      29|     210|     237|       3
---------------------------------------------------------------------------
  210-  232 (38.31/16.10)	RGIHSGSVVDRSQRRSFMTDESK
  242-  264 (33.17/19.80)	RGIPSRIFSDLSEADTDLSFVSS
  304-  325 (35.48/14.07)	RGSELSSFNDFSS.SSFETDDGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.86|      27|      28|       7|      33|       4
---------------------------------------------------------------------------
    7-   33 (47.00/32.08)	KGSPGNRRGNGNGVVAL.AIDKDKGSQY
   36-   63 (41.86/27.80)	KWATDNLVNRGQTIVLIhVVTKPISSQY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15932 with Med32 domain of Kingdom Viridiplantae
Unable to open file!