<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15929

Description Putative LRR receptor-like serine/threonine-protein kinase
SequenceMVHFTYIKLKVSNGRALLDLDRSNSTRDNSPSTSVLRMNTCFSQHIKVSDTFLGIVLEMPFSLKTILQSCWVYLQCRNTWLTVSKVSPHRKYQEHKFSLGQRADASTDWREFTSPEGRKYYYNEVTRTSKWRKPDEVKVMLDLNPIWLAREKDTISHASDFGSIFVVKTSSPRADESSSLSGKVSSPMIETVEMKNSSKPASPAVANLEKIGIAVTLGNSVAPPVSETTTAQDAVVYGDGFSSENRENVKKDAAITEIGGATPSDEKTVELGPLVYESKAAKSAFKTLLESVNIGSDCMWDQAMRAVINDRRYGALKSLGERKQAFNEYLSQKKKLEAEERRVKQKKAREDFRIIKAISIFEHDERFKDVERDKDCEDLFEDYVEELEKNVKLLLLNFLEHAKALEEQKRNRVEYLEFLKSCDFIKASSQWQKVQDCLETDERCSRLEKIDRLEIFQEYIRYLESEDEEQRKLRMEELRKAERKNRDEVRKLMEEHVAAGILNAKTNWRDYCISVSFSFLCSIKEFAAYLVVSSNTSGSPTKDLFTDVMDELEKQWLLAVVLVVIDELVGSRNRPVAVGGGGVGSRGVHGLIWVVHDDGFENTLFTITFASTEEATALLKWKTTFKNQNNSLLASWKPSSDACNGWYGVICFIGRVNRLNIKNSRVIGTLYDFPFSSLRFLEYFELSMNNLSGTIPPEISNLTSLIYLDLSINQISGTIPPEISLLTRLQTLHIFANHLNGSIPEEIGYLRSLT
Length754
PositionUnknown
OrganismCapsicum chinense (Scotch bonnet) (Bonnet pepper)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
Aromaticity0.09
Grand average of hydropathy-0.394
Instability index38.10
Isoelectric point6.18
Molecular weight85809.49
Publications
PubMed=29089032

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
kinase activity	GO:0016301	IEA:UniProtKB-KW

GO - Biological Process
mRNA cis splicing, via spliceosome	GO:0045292	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15929
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     111.75|      21|      21|     683|     703|       1
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  683-  703 (41.15/28.39)	YFELSMNNLSGTIPPEISNLT
  707-  727 (39.51/26.97)	YLDLSINQISGTIPPEISLLT
  731-  750 (31.09/19.65)	TLHIFANHLNGSIPEEIGYL.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.20|      13|      15|     181|     193|       2
---------------------------------------------------------------------------
  181-  193 (22.35/13.60)	SGKVSSPMIETVE
  197-  209 (21.85/13.15)	SSKPASPAVANLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.94|      16|      17|     461|     477|       3
---------------------------------------------------------------------------
  461-  477 (24.28/20.43)	RYLESED.EEQRKLrMEE
  479-  495 (23.67/14.19)	RKAERKNrDEVRKL.MEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.14|      21|      74|     361|     384|       4
---------------------------------------------------------------------------
  361-  383 (35.55/23.02)	FEHDERFKDVErdK.DCEDLFEDY
  438-  459 (33.59/15.52)	LETDERCSRLE..KiDRLEIFQEY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     182.81|      43|     219|      63|     105|       5
---------------------------------------------------------------------------
   63-  105 (80.19/62.95)	LKTILQSCWVYLQCRNTW.L.....TVSKVSPHRKYQEHKFSLGQRADA
  137-  175 (45.86/32.49)	VK.......VMLDLNPIW.LarekdTISHASDFGSIFVVKTS.SPRAD.
  286-  325 (56.76/42.16)	.KTLLESVNIGSDCM..WdQ.....AMRAVINDRRYGALK.SLGERKQA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.50|       9|     356|     235|     245|       7
---------------------------------------------------------------------------
  235-  245 (14.33/12.02)	VVYGDGFssEN
  594-  602 (19.17/ 9.41)	VVHDDGF..EN
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15929 with Med35 domain of Kingdom Viridiplantae
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