<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15901

Description 60S acidic ribosomal protein P2
SequenceMRTKYPHLFFANLDSAQVGAEGEDDRIQLLLPKVKGKDMTELIASGGEKLASVPSGGGLFSVSYSEKEIPIVAGKSKSESKDKEKKHKKHKDKDKEHKKHKHRHKDRCKDKDKEKKKDRTGHHDSGADLSKWKSGFRDSLKIEENAESKDAPVDDIGLKPKTISDASLVKALPSVVIVEREGHIISCAALFPYFEEKCGEVSAIVVSPDCRGQGQGDKLFDQSGISTRDKGLSWEVSLNLMEERNGQIMKSNLTDLRSYCKVLMVYFPASVLLKDR
Length276
PositionHead
OrganismCapsicum annuum (Capsicum pepper)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
Aromaticity0.05
Grand average of hydropathy-0.756
Instability index30.99
Isoelectric point8.95
Molecular weight30779.77
Publications
PubMed=29089032

Function

Annotated function 
GO - Cellular Component
cytoplasm	GO:0005737	IEA:InterPro
ribosome	GO:0005840	IEA:UniProtKB-KW

GO - Biological Function
acetyl-CoA:L-glutamate N-acetyltransferase activity	GO:0004042	IEA:InterPro

GO - Biological Process
arginine biosynthetic process	GO:0006526	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15901
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.15|      15|      15|      92|     106|       2
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   92-  106 (30.08/17.49)	DKDKEHKKHKHRHKD
  110-  124 (29.08/16.67)	DKDKEKKKDRTGHHD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15901 with Med19 domain of Kingdom Viridiplantae
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