Description | Mediator of RNA polymerase II transcription subunit 22b |
Sequence | MQSITNSTAAAAASQKDKSLLLRLDANIGNIVENYGFIVNAAWVNDPPVRNSQEVFVMKIRAFRMVHEDESLLKLVLELKKIARFSGFASLNDHMDQRTGEFTKPTEKI |
Length | 109 |
Position | Head |
Organism | Capsicum annuum (Capsicum pepper) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.214 |
Instability index | 25.46 |
Isoelectric point | 8.05 |
Molecular weight | 12251.93 |
Publications | PubMed=24441736 PubMed=29089032 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP15887 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 83.56| 27| 49| 15| 46| 1 --------------------------------------------------------------------------- 15- 46 (38.54/41.55) QKDKSlLLRLDANIGNIVENYGFivnaAWVND 67- 93 (45.02/31.87) HEDES.LLKLVLELKKIARFSGF....ASLND --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) DQRTGEF 2) KSLLLRLDANI 3) LLKLVLELKKIARF | 96 18 72 | 102 28 85 |
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