<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15884
Description |
Mediator of RNA polymerase II transcription subunit 12 |
Sequence | MQRYHGGSCTSAVNNNTTGGPSARDSSRVDSASLPPNFSRRPLQLTPYKLKCDKEHLNSRLGPPDFLPQTPNCPEETLTKEYVQFGYRETVEGLEEVKEISLTQVPTFTKPVIFKCKEAIRKCHRAINESRAQKRKAGQVYGVPLEGLQLTKPGIFPEQRSCGEEFRKKWIEGLSQQHKRLKSLADHVPHGYRRKPLFEVLIRNNVPLLRSTWFVKVNYLNQVRPGSSSISSGVSDKTHISRSEQWTKDVIDYLQYLLDEFISKNSVHSALHIRDRSPQMVYAGSIQLKSDPTLGTIDCEEPSLHFKWWYVVRILQWHHREGLLIPSLVIDWVLNQLQEKELLGVLQLLLPVIYGFIDTVVLSQSCVRTLVGIAIRFIQEPSPGGSDLVDNSRRAYTMAALVEMLRYLMLAVPDTFVALDCFPMPSCVMTNVVTDGSLYSKVTEDTRKVKNGPFEVAYFLRDKGPEVRSDSYSIGRVVSSIQKRAQHLAVAARPGHPGQSVVKALHALDKSLALGDLRDAYKFLFENVHESSSDDCWFAEVSSCLRSSLKFIRGVTLSSVCSVFFICEWATCDFRDFRSAPPRGMKFTGRKDFSAIYVAVRLLKLKMREAGISSRRRAPKIVKNDYLRKDPGQLTNYAGRSPASGAAESLCNSRHAREKCGDSLGMFDSPCPLHDILVCWIDQHAVHNTEGFKRLQLLIVELIRAGIFYPQAYVRQLIVSGIMDGDGPLSDPVKQKRHCKILKHLPGPYVHDALEEARIAESPVLSEVVNVYCNERKLVLRGMIDSYNSVFGSSYHKHKPRPNSGERLAAPSIDQLRSSESGSFPLSKDVGKGVELEELKGSITALLQFPSSSSTDTGVDESQVSLKKGVVYGSNGMDNSEGTPGCEECRRAKKQKLSEEKSSYSQIYPQNPSDDEETWWMRKGQKSIESFRAEPPPKPAKTGSRGRQKIVRKTQSLAQLAAARIEGSQGASTSHVCDSKVSCPHHRPGVEGNVPKSADGTRMPYGDVVSIGKVLKQVRFVDKRTMTVWLIGTVKQLVEEPEKTATKVGQHGRPFSAADERGCVRWKLGEDELSAVLYLIDACDELVLAVRFLLWLLPKVLGSCSATVHGSRNILTIPKNSENSVCEVGEAYLLSSMRRYEGIIVAADLIPETLSVVMHRAQAILTSNGRVPGSPPVIYARYLLKKFGSVGSVTEWEKNVKSTFDKRLVSEVESGRLVDGEFGFPLGVPVGVQDADDYFRQKITGVRVSRVGLSMRDIVQKKVDEAVNYFYGKDRKLFGLNSGKFPGFQKWEDVYQIGQQIVTGLMDCMRQTGGAAQEGDPTLVSSAISAIVCNVGQVIAKIPDLTASNNHLSSSISASLQFARCMLRIHVVCLSILKEALGERQSRVFEVALATETSSALAQLSAPGKAPRSQFQLSPESNDVNLSSDMLNNSSRVAIGRTAKISAAVSALVIGAILQGVSSLERMVSLFRLKDGLDVVHFVRSMRSNSNGNARSVGTLKADSLAEVSVHWFRVLVGNCRTVSDGFVVDLLGEASILSLCRMQRMLSLNLVFPPAYSMFAFVLWRSLILNVSSGTRDEVQHLHHSLMLAFGDVIKHLPFREVCLRDTHSLYDLIAADTVDSDFASLLEASGIDLRSKASAFVPLRARLFLNALIDCRITQPIVKQNDGNQVAVQGESKFHCAENETKLLDKLVCILDTLQPAKFHWQWVELRLLLNEQAVIEKLDAQDLSLVEALRSLSPNTDKASASEIESNIIEMILTRLLVRPDAAPLFAEVVHLLGRSLEDSMLLQAKWFLGGHDVLFGRKSVRQRLSNIAVNRNISTRAQYWKPWGWCTSNSDPITSKREKFKSEVSSIEEGEVVGEGTTLKRPVKGSGRTFDFERLHVSQQHVTERALIDLILPCLDQASDDSRSTFASDMIKQMNHIEQQINTVTREASKPAGTVASGIESPTTKSGRKGTRGSSPGLARRVTGPAETVPPSPVALRASLSVRLQFILRLFPIIYADREPSGRNMRHVLASVILRILGSRVVHEDASYSFNQASSSKREVDSLMEASATASVVISLESLFDHLLLLLHGLLSCHQPRWLKWKSSTKSTSESSKDYSAFDREGAESLQNELDRMQLPETVRWRIQCAMPILSPTARCSISCQPPSVTPSALSSLLPSNPISILHSSNGSNQTQRNPVSLLRTATSVAGKAKQVSSQQENDLEVDPWILLEDGAGSSHSSSNSPLVGGGDHANLKAPNWLKGTVRVRRTDLTYIGAVDDDS |
Length | 2267 |
Position | Kinase |
Organism | Capsicum annuum (Capsicum pepper) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.239 |
Instability index | 47.73 |
Isoelectric point | 8.93 |
Molecular weight | 250861.90 |
Publications | PubMed=29089032
|
Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of development, heterochronic GO:0040034 IEA:EnsemblPlants
regulation of radial pattern formation GO:0090213 IEA:EnsemblPlants
regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP15884
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 114.92| 40| 291| 1442| 1486| 1
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1442- 1486 (58.48/52.13) TAKISAA.VSALVIGAILQGVSSLERMVSLFrlkdgLDVVHFV.RSM
1743- 1784 (56.45/37.95) TDKASASeIESNIIEMILTRLLVRPDAAPLF.....AEVVHLLgRSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.88| 15| 929| 253| 267| 2
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253- 267 (27.43/17.59) YLQYLLDEFISKNSV
1179- 1193 (27.45/17.60) YARYLLKKFGSVGSV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 309.68| 99| 108| 1809| 1916| 6
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1809- 1916 (147.51/112.81) RQrLSNIAVNRNISTRaQYWKPWGWCTSNSDPITSKREKFKSEVSSIEEG.EVVGEGTTLKrPVKGSGRTfdfeRLHVSQQHVTEraLIDLILPCLDQASDDSRSTFAS
1920- 2019 (162.17/96.14) KQ.MNHIEQQINTVTR.EASKPAGTVASGIESPTTKSGRKGTRGSSPGLArRVTGPAETVP.PSPVALRA....SLSVRLQFILR..LFPIIYADREPSGRNMRHVLAS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 66.03| 20| 844| 542| 561| 18
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542- 561 (35.33/21.07) SSCLRSSLKFIR.GVTLSSVC
1353- 1373 (30.70/17.32) SSSISASLQFARcMLRIHVVC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.95| 16| 399| 815| 831| 23
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815- 831 (24.89/17.61) QLRSSESGsFPLSKDVG
1216- 1231 (31.06/17.72) RLVDGEFG.FPLGVPVG
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