<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15872
Description |
Uncharacterized protein |
Sequence | MITSQSCSARETITIKRADASTDLREFTSLEGRKYFYNKVTRMSKWRMPNEVKLAHEKDTILHASDLGSIFVVKTLSPGADGSLVSAHGAKSSLISVSQAANLPTIMASESSSLSSKVSSPMIETVKIKNSSEPTSPAVANLEKIGIAVTLGNSVAPPNVKKDAAITEIGGATPSDEKTVELGPLVYENQAKAKSAFKTLLKSTNIGSDYTWDQAMRAVINDRRYGALKSLCERKQAFNEYLSQKKKLEAEERRVKQKKAREDFRIMLEDCKELSPSSRWSKVISILENDKRFKSVERAKDRDDLFEDYVEELDKKEYAKALEVQKHNRRGDRTSIVPLLLTSFVQASSQWQKVQDRLEIDERCSHLEKIDRLEIFQEYIRDLESEEEEQRKLRMIKDFAAYLAVSSNTSGSIVKDLFTDVMDELEKQVQVLSSRFDSDSSGTLSYILYCGESSCSEDVINMPPHRVRRNNDGQQPQPADPLNENVSHAKFRAAFQGDDLVTARIRDFMRMNPPEFYGSKSDEDPQLFLEEVWKITQVMHVSEEHSVELIVYRLKDLSYNWVISLRKGRGEGAIPIIWQEFQDAFLDKFFPLEMREANVEEFMNLGQGSMTIREYRLKFNQLAKYAPNLVADNRASMSKFVTGVSSYVVKECRSAMLNSDKNLSRLMTHA |
Length | 670 |
Position | Unknown |
Organism | Capsicum annuum (Capsicum pepper) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.539 |
Instability index | 41.66 |
Isoelectric point | 6.45 |
Molecular weight | 76069.37 |
Publications | PubMed=29089032
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Function
Annotated function |
|
GO - Cellular Component | U1 snRNP GO:0005685 IBA:GO_Central
U2-type prespliceosome GO:0071004 IBA:GO_Central
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GO - Biological Function | RNA binding GO:0003723 IBA:GO_Central
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GO - Biological Process | mRNA cis splicing, via spliceosome GO:0045292 IEA:InterPro
mRNA splicing, via spliceosome GO:0000398 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP15872
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 340.77| 68| 68| 250| 317| 1
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190- 249 (81.03/54.82) .......QAKAKSAFK...TLLKS.TNIGSDYTWDQAMRAVINDRRYGALKSLCERKQAFNEYLSQKKKLE
250- 317 (109.10/76.50) AEERRVKQKKAREDFR...IMLEDCKELSPSSRWSKVISILENDKRFKSVERAKDRDDLFEDYVEELDKKE
319- 387 (94.72/65.39) AKALEVQKHNRRGD.RtsiVPLLLTSFVQASSQWQKVQDRLEIDERCSHLEKI.DRLEIFQEYIRDLESEE
388- 428 (55.93/35.43) EEQRKLRMIK...DFA...AYL....AVSSNTSGSIV...................KDLFTDVMDELEKQ.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.07| 14| 16| 115| 128| 2
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115- 128 (23.81/13.46) SSKVSSPMI...ETVKI
131- 147 (19.26/ 9.72) SSEPTSPAVanlEKIGI
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