Description | Mediator of RNA polymerase II transcription subunit 9 |
Sequence | MDHFGGGSWTMIPNIQSQSNPSTPNNQDLFLQQQQFQQQQFNQPQLYQQQQQQQQQQQQQQQHIHQFFNSTRLTQXQQMQQHQMQQQQQQHQQQQQQQQQHHQSLASHFHLLQLVENLADTIENGNRDQHSDALVTELKNQFEKCQQLLISISGSISSRSMTVEGQKRKKAECEQLLNQRRDLISKYKGSVEDIIKSEL |
Length | 199 |
Position | Middle |
Organism | Capsicum annuum (Capsicum pepper) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum. |
Aromaticity | 0.06 |
Grand average of hydropathy | -1.272 |
Instability index | 73.19 |
Isoelectric point | 6.54 |
Molecular weight | 23398.45 |
Publications | PubMed=29089032 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP15861 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 123.74| 31| 40| 39| 70| 1 --------------------------------------------------------------------------- 39- 70 (60.67/17.07) QQFNQPQLYQQQQQQQQQQQQQQQHiHQFFNS 77- 107 (63.07/15.68) QQMQQHQMQQQQQQHQQQQQQQQQH.HQSLAS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 87.29| 26| 26| 139| 164| 2 --------------------------------------------------------------------------- 139- 164 (43.74/30.14) KNQFEKCQQLLISISGSISSRSMTVE 167- 192 (43.55/29.97) KRKKAECEQLLNQRRDLISKYKGSVE --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) GRPIKPTFQRKLNNDDMKFQH 2) HQKKQ 3) KKEHPKHGPRARNPHMRPANH 4) KPVRRH | 432 411 516 376 | 452 415 536 381 |
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