<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15855
Description |
Uncharacterized protein |
Sequence | MLFSLGQRADSSTGWREFTRPEGRKYYYNKVTRTSKWRMPDEVKLAREKDITSHTSDFGSIPVVKTSSSGADSSLVSAHGAKSSPIAVSPTANLPTILASESSSLSGKVSSMMIETVEMKNSSEPSLPAVADSEKIGIAVTLGNSVAPPVFETTTAQDAVVYGDGFSSENRENVKKNAAITEIGGATPSDEKTVELGPLVYESKAAKSAFKTLLESVNIGSDCMWDQAMRAVINDRRYGALKSLGERKQAFNEVSLQKKLEAEERHVKQKKAREDFRIMLEDCKELSPSSRWEANSIFKHDERFKAAERAKDHEDLFEDYVEELEKKEHAKALEEQKHNKVEYLECLKSCDFIKVFVLWRKVQDRLETNERCSLLEKIDRLEIFQEYIRDLESKEEEQRKLWMEELRKAERKNRDEFRKLMEEQVAAGILNAKTNWRDYYIKIKDFAAYPAVSSNTSGSTAKNLFTDVMDELEKQYLDDKSQIKDAVRMAEIGLTLAWKLDDFKVAIAKYISSPPMSDTNLKFVFEELLERAREKEEKEAKKRKRLADEFYELLHASKILNDDDILDASVVSCVSTDILNADDILDASIVSSASTDTE |
Length | 598 |
Position | Unknown |
Organism | Capsicum annuum (Capsicum pepper) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.615 |
Instability index | 41.87 |
Isoelectric point | 5.31 |
Molecular weight | 67769.60 |
Publications | PubMed=29089032
|
Function
Annotated function |
|
GO - Cellular Component | U1 snRNP GO:0005685 IBA:GO_Central
U2-type prespliceosome GO:0071004 IBA:GO_Central
|
GO - Biological Function | RNA binding GO:0003723 IBA:GO_Central
|
GO - Biological Process | mRNA cis splicing, via spliceosome GO:0045292 IEA:InterPro
mRNA splicing, via spliceosome GO:0000398 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP15855
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.29| 18| 18| 560| 577| 1
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560- 577 (35.05/25.96) LNDDDILDASVVSCVSTD
579- 596 (33.24/24.24) LNADDILDASIVSSASTD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.30| 18| 18| 388| 405| 2
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379- 396 (27.22/15.17) DRLEIFQEYIRDLESKE.E
397- 415 (27.09/15.06) EQRKLWMEELRKAERKNrD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 62.26| 18| 19| 308| 325| 3
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308- 325 (31.32/23.49) ERAKDHEDLFEDYVEELE
328- 345 (30.94/23.11) EHAKALEEQKHNKVEYLE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 65.34| 20| 20| 102| 121| 4
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67- 102 (17.37/ 9.77) S..S.SGADSSLVsahgaksspiavsptanLP.TILASES
103- 122 (33.58/26.78) S..SLSGKVSSMM.................IE.TVEMKNS
123- 144 (14.40/ 6.66) SepSLPAVADSEK.................IGiAVTLGN.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.48| 13| 20| 15| 34| 5
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15- 30 (21.95/24.00) WReftRPEGRKYYYNK
37- 49 (24.54/ 8.26) WR...MPDEVKLAREK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 35.91| 12| 20| 186| 197| 6
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186- 197 (21.10/16.11) ATPSDEKT....VELG
205- 220 (14.81/ 8.84) AAKSAFKTllesVNIG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.54| 17| 271| 256| 284| 7
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256- 272 (26.70/34.83) LQKKLEAEE..RHVKQKKA
288- 306 (25.84/ 6.85) PSSRWEANSifKHDERFKA
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