<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15854
Description |
Mediator of RNA polymerase II transcription subunit 33B |
Sequence | MEVPMQCSLWESVLELTKVAQEKGGDPLVWAIQVSSCLSSSGVSLPSLELANFLVSHICWENNLPIAWKFLEKALVIKIVSPIIVFPLLSSRVIQNRHLRPAAYRLYMELLRRHIFTLKIHVNMQSYKKILNFLDSVLHLTEVFGMHADEPGVLVVEIIFSIVWQLLDASLDDEGLLQLTPEKKSRWPTKTEDMEIDGCIADMERNEHKERLKNLNTLLAIELIGQFLQNKATARILYLARQNMPVHWGAFVQHIQLLAGNSSALQSSSIISPKALLQLASDAHNLIKANSLQEYVRSTSRSLDTCAGFCFGSSRSSLWLPLDLLLEDAMDGSQVNATSAIEIITDLVKSLQAINATTWHETFLGLWMAALRLVQRERDPIEVPVPRLDTRLCMLFSLITLVIADLIEEEESEAFEGTRRGDVVSCLQYLGDYQSLLTPPQAVTTAANQAAAKAMMFRSGINTSTSYFECINMKDMPTNCSGNLHHLIVEACIARHLLDTSAYFWPGYVNGHMNQLPASMPTQVPGWSSFMKGAPLTPAMINTLVSAPASSLAELEKIFEMAVKGANDEKIAAATILCGASLILGWNIQEHTVNFITRLLSPPVPTDYSGKESHLIGYAPMLNVLLVGIAPVDCVQIFSLHGMVPQLAASSMTICEVFGSCAPNISWTLTTGEDISVHAVFSNAFALLLKLWRFNHPPLEYRVGDVPPVGCQLTPEYLLLVRNSHLVSSGNMLKDPNRRRLATVASSSSPNPIFVDSFPKLRVWYRQHLACIASTLSGLVNGTLVCQTVDVLLNMMFKKINSGSQSLISVTSGSSSSSGTGSEDTSPRPKLPAWDILEAIPFVVDAALTACAHGRLSPRELCTGLKDLADFLPASLPTIVSYFSAEVTRGVWKPVFMNGTDWPSPAANLSNVEEQIKRILAATGVDVPSLAAGGSSPAILPLPLAAFVSLTITYKLDKASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKAKRWSDFLVFSASRTVFLSNNHAVIQLLKSCFNATLGLNSSSISSNGGIGALLGHGFGSHFYSGISPVAPGILYLRVYRSIRDIMFLREEIVLLLMQSISEIAHSELPRQRLNKLKIPKNGKKFGNVSLAATMTRVKLAALLGASLLWLSGGSGLVQSLIKETLPSWFLSVHNTNQEGDIGLLVPMLKGYALAYFAVLCGAFASGVDSLSMASKRRPKIIGRHVEFIASVLDGKISLGCDPATWHAYVSGFVSLMVGCTPTWVFEVDAELLKRLSKGLRRWHEEDLALALLSIGGIGTMGSAAELIMEASS |
Length | 1304 |
Position | Tail |
Organism | Capsicum baccatum (Peruvian pepper) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.232 |
Instability index | 48.00 |
Isoelectric point | 6.69 |
Molecular weight | 142257.62 |
Publications | PubMed=29089032
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Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP15854
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 235.61| 59| 296| 882| 952| 1
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890- 948 (99.98/49.78) GVWKPVFMNGTDWPSPAANLSNVEEQIKRILAATGVDVPSLAAGGSSPAILPL....PLAAFV
1141- 1188 (51.76/17.93) ............WLSGGSGL..VQSLIKETLPSWFLSVHNTNQEGDIGLLVPMlkgyALAYF.
1189- 1241 (83.87/32.32) AVLCGAFASGVD......SLSMASKRRPKIIGRHVEFIASVLDGKISLGCDPA....TWHAYV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 164.48| 47| 131| 477| 526| 2
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477- 526 (88.38/65.04) PTNCSGNLHHLIVEACIARHLL......DTSAYFWpgyVNGHMNQLPASMPT..QVPG
605- 659 (76.10/47.11) PTDYSGKESHLIGYAPMLNVLLvgiapvDCVQIFS...LHGMVPQLAASSMTicEVFG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 159.68| 52| 297| 419| 471| 4
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419- 471 (88.11/56.52) RRGDV..VSClQYLGDY............QSLLTPP..QAVTTAANQAAAKAMMFRSGINTSTSY...FECI
702- 772 (71.57/41.35) RVGDVppVGC.QLTPEYlllvrnshlvssGNMLKDPnrRRLATVASSSSPNPIFVDSFPKLRVWYrqhLACI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 139.03| 45| 47| 259| 304| 5
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259- 304 (67.02/44.21) AGNSSALQSSSIISP.KALLQLASDAhNLIKANSLQEYVRSTSRSLD
307- 352 (72.01/42.89) AGFCFGSSRSSLWLPlDLLLEDAMDG.SQVNATSAIEIITDLVKSLQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 196.07| 64| 467| 527| 602| 9
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527- 602 (83.99/67.51) WSSFMkgapLTPAMINTLVSAPASSLAELEKIFEmAVKGANDEKIAAATilcGASLILGWNIQEHtvnFITRlLSP
997- 1060 (112.08/56.37) WSDFL....VFSASRTVFLSNNHAVIQLLKSCFN.ATLGLNSSSISSNG...GIGALLGHGFGSH...FYSG.ISP
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