<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15846

Description Uncharacterized protein
SequenceMLAYGLRKTLQELLDEMALLEQQAKSLVDVALDADSSDGSFGWLALQEQWRRGFPCRSSMVHAGCVGVLASCHSLDIAGVELIDPLSADASHLLASESKDIDFSYCSFHGRSQSDDGGISGDSFSAESTASASECRDSSSTISLSVGSQSSAGGSSSLRDFPGCGPLTTIFPMTPSKETKKFAEQALELYNEDNVAISDVCLYQRLSKIGSIPFHIELMEGYAAQALEQYNKENDTTYEVDQILRRGIYSIHYITLTVKNGVEEYFQVKVVRDPNRQAKGNEI
Length283
PositionKinase
OrganismCapsicum baccatum (Peruvian pepper)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
Aromaticity0.08
Grand average of hydropathy-0.249
Instability index51.75
Isoelectric point4.68
Molecular weight30839.01
Publications
PubMed=29089032

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15846
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.08|      33|      35|      84|     118|       1
---------------------------------------------------------------------------
   84-  118 (53.74/36.32)	DPLSADaSHLLASESKDiDFSYCSFHGRSQSDDGG
  122-  154 (57.35/30.91)	DSFSAE.STASASECRD.SSSTISLSVGSQSSAGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.87|      13|      37|     182|     194|       2
---------------------------------------------------------------------------
  182-  194 (24.36/17.66)	FAEQALELYNEDN
  222-  234 (24.52/17.82)	YAAQALEQYNKEN
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15846 with Med13 domain of Kingdom Viridiplantae
Unable to open file!