<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15815

Description U-box domain-containing protein 34
SequenceMSQKSFSGEKDKATVVAIDKDKGSQYALKWAIDNLIGRGKNVTLLHVKIRPSNSVPNADVSDGTPRVYKSDPDALAKELFLPFRCFCNRKNIQVNEVVLEGIDIANSISDYVTANVIENLVMGATSRNGFVSRFKTIDVPSSVSKVIPGFCTVYVIAKGKVQSIKNATSPVPSSPPVTLQNQTTASLGAKLGFVDTRYGQSNDTRGSMTEIRSPYATRSSNDDTDFIKSPFNRGKGINRSYGDLSVGESDLSFVSSGRPSSDRTFPISMDSHDLGLPPRLSNSSDTDIKYSAPRLSNSSETDSRLSFGSSYSATRLSEVNAFSSNSFESGNGSWSSTNNLEEIEAEMRRLKQELKQTMDMYSSACKEALSAKHKALELHRWKVEEEQKLEDARLAEEAALAIAEKEKAKCRAALEAAEEAQRIAEREAQRRITAERKALIEAEEKKKVLNALAQSDCRYRKYTIEEIEAATDNFAASRKIGEGGYGPVYKCYLDHTQVAIKVLRPDAAQGRSQFQQEIEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLDDRLFRRGNTPVLPWQLRFRIAAEVGTSLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGTKSDIYSFGIMLLQIITARPPMGLTHHVERAIEKGTIADMLDPAVPDWPIEEALTFAKLALKCAELRRKDRPDLGTVILPELNRLRILAEEAMQPMHFGRSPTSESRSIPQVISGFDSNKSRSSNPFSSSTKSSGE
Length791
PositionTail
OrganismCapsicum baccatum (Peruvian pepper)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
Aromaticity0.07
Grand average of hydropathy-0.425
Instability index48.25
Isoelectric point8.09
Molecular weight87415.92
Publications
PubMed=29089032

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15815
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     101.06|      35|      42|     365|     406|       1
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  365-  406 (47.99/48.85)	CKEALSAkhkALELHRWKVEEEQKledaRL.AEEAALAIAEKE
  410-  445 (53.07/34.69)	CRAALEA...AEEAQRIAEREAQR....RItAERKALIEAEEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.97|      29|      41|     238|     274|       2
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  198-  226 (48.68/25.92)	YGQSNDTRGSMTEIRS..PYATRS...SNDDTDF
  241-  274 (40.29/44.11)	YGDLSVGESDLSFVSSgrPSSDRTfpiSMDSHDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.51|      19|      22|     290|     311|       3
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  290-  309 (30.96/22.57)	YSAPRLSNSSETDSRlSFGS
  311-  329 (33.55/19.73)	YSATRLSEVNAFSSN.SFES
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.70|      20|     167|     557|     576|       9
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  557-  576 (39.07/27.59)	FRRGNTP.....VLPWQLRFRIAAE
  721-  745 (29.62/19.09)	LRRKDRPdlgtvILPELNRLRILAE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15815 with Med32 domain of Kingdom Viridiplantae
Unable to open file!