<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15799

Description Heat shock 70 kDa protein
SequenceMSSSSSVKEGKAIGIDLGTTYSCVGVWINDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFTDPSVQSDIKLWPFKVYSGPGDKPMIEVSYKGEKKQFSAEEISSMVLVKMKETAESFLGFKVKNSVVTVPAYFNDSQRQATKDAGAISGMNVLRIINEPTAAAIAYGLDKKASRRGEQNVLVFDLGGGTFDVSILTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFRRKNKKDLSGNARALRRLRTACERAKRTLSSTTQTTLEVDSLFEGIDFYATITRARFEELCMDLFIKCMDPVEKCLRDAKIDKSQIHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILTGEGDEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQIFSTYSDSQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQINVTFDIDANGILNVTAEDKTAGVKNKITITNDKGRLSKDDIERMVSDAERYKAEDEEVKRKVEAKNGLENYAYNMRNTIKDEKIAGKLSTEDKEKIEHAVQETIEWLDKNQLAEVDELEDKLKELEGICNPIIARMYQDGDADGGAMDDDQMHGGGGGSTTGSSGGTGPGAGPKIEEVD
Length662
PositionUnknown
OrganismCapsicum baccatum (Peruvian pepper)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
Aromaticity0.06
Grand average of hydropathy-0.445
Instability index34.88
Isoelectric point5.11
Molecular weight72600.06
Publications
PubMed=29089032

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15799
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.59|      13|      26|      45|      58|       1
---------------------------------------------------------------------------
   45-   58 (20.37/22.30)	PSYVAFtDTERLIG
   69-   81 (25.22/20.86)	PHNTVF.DAKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.98|      28|      51|     500|     527|       2
---------------------------------------------------------------------------
  500-  527 (45.73/33.77)	EDKTAGVKNKITITNDKGRLSKDDIERM
  552-  579 (46.25/34.25)	ENYAYNMRNTIKDEKIAGKLSTEDKEKI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.98|      14|      45|     344|     359|       3
---------------------------------------------------------------------------
  344-  359 (18.85/14.79)	VLVGGSTRipKVQQLL
  388-  401 (24.13/11.96)	ILTGEGDE..KVQDLL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15799 with Med37 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MYQDGDADGGAMDDDQMHGGGGGSTTGSSGGTGPGAGPKIEEVD
619
662










Molecular Recognition Features






MoRF SequenceStartStop




1) TGSSGGTGPGAGPKIEEVD
644
662