<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15790

Description U-box domain-containing protein 35
SequenceMWPSPVNMHGERMPLPNKLVAVAIDKDKGSQIALKWTVDHLLAKGQTVLLIHVKLKQSANASGQSSKSNQLSDEGGSGNIEMDTQTRDLFLPFRVFCTRKDIQCYDVVLDDTDVAKATVEYVNRTGVEILVVGATTKGGLLRFKAKDIPGGMLKGAPDFCTVHIISKSGKISSTRAASRPAPFVHPLRHQLMQTASTKFSFESSTPSSATSRNSFPGAPKPVFDPPPSTIQSDTMSIKSPFTHRKGPNGKPYELSLPDTDISYVSSGRPSVDNIYASLSDSYESGAPTPPRLSGFSDFDTQSFDSTQFGRRSVDTLTPPELSIASMEGDRTSFSQGPGRLQQNKRHDKGNYYSSRPLHNDSTDVLTCCLLQAMELQRWKMEEKRRLEEARLAEEAALAIAEREKARSRAAIEHAEASQRLAELEAQKRISAEMKALKEAEEKNKILNKLSNSDSRYRKYTIEEIESATDYFAQSRKIGEGGYGPVYKCYLDHTPVAVKVLRPDATHGRQQFQQEIEVLSCIRHPNMVLLLGACPEYGCLVYEFMSNGSLDDRLFHRGKTPPLSWQQRFRIAAEIATGLLFLHQSKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQILTARSPMGITHYVERAIEKGTFHEMLDPAISDWPLDEAMCLANLSLQCSELRRKDRPDLGKVVLPELERLRTLAEENTCPSLMYNLNISPNHSQVSLSRVSQRFINYEFTVLYTIRSPKRELEVSLGKSKIHKLRVYNFKSELEVSLDESDSSHGDCCWKKIKPSLAKQGDSNSYVDILVSSSKTPSAIEKPKKVQVLEDPHQSKPQHSSKSVVGPDSRELLLSPKEVTSNPCDDIEFILNDMSRMGADISPLQDLVGSFFGLTTSYDQARSVFVDKTTIMKESEPYLKSKEHLELVLREGDKKFEEVFPACKSIEKSRKKVKKLKAHRDVAKQKAAEMEFKVSTAKKEFSKCSDVSLAMKNTSKVVEKKNQVLKDALQDFVNNKLYLD
Length1056
PositionTail
OrganismCapsicum baccatum (Peruvian pepper)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
Aromaticity0.07
Grand average of hydropathy-0.491
Instability index50.04
Isoelectric point8.63
Molecular weight118080.19
Publications
PubMed=29089032

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15790
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     148.25|      23|      28|     288|     310|       1
---------------------------------------------------------------------------
  226-  244 (26.64/12.88)	.PP..STIQS.DTMSI........KSPFTHR
  249-  268 (30.97/16.19)	GKPYELSLPDTDI.SY........VSS..GR
  288-  310 (42.84/25.27)	TPPRLSGFSDFDTQSF........DSTQFGR
  317-  335 (28.59/14.37)	TPPELSIAS....MEG........DRTSFSQ
  336-  363 (19.21/ 7.19)	GPGRLQQNKRHDKGNYyssrplhnDSTD...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.69|      18|      20|     813|     832|       2
---------------------------------------------------------------------------
  815-  832 (36.44/22.59)	DESDS.SHGDCCWKKIK.PS
  835-  854 (22.25/ 6.26)	KQGDSnSYVDILVSSSKtPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.12|      24|      28|     377|     404|       3
---------------------------------------------------------------------------
  379-  403 (35.70/27.78)	KMEEKRRLEEA....RLAE.EA.........ALAIAErE
  404-  441 (22.41/ 8.66)	KARSRAAIEHAeasqRLAElEAqkrisaemkALKEAE.E
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.60|      19|      29|     485|     507|       4
---------------------------------------------------------------------------
  479-  500 (22.48/15.68)	EGGYG........pVYKCyLDHtPVAVKVL
  503-  530 (27.12/16.29)	DATHGrqqfqqeieVLSC.IRH.PNMVLLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     211.66|      72|      78|     895|     972|       6
---------------------------------------------------------------------------
  895-  972 (102.51/78.21)	VTSnPCDDIEFILNDMSRMGA..DISPlQDLVGSFFGLTTSyDQARSVFVDKTTIMKESEPYLKSKEHlelVLREGDKKF
  975- 1048 (109.16/63.71)	VFP.ACKSIEKSRKKVKKLKAhrDVAK.QKAAEMEFKVSTA.KKEFSKCSDVSLAMKNTSKVVEKKNQ...VLKDALQDF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.88|      10|      27|     553|     562|       8
---------------------------------------------------------------------------
  553-  562 (19.63/10.92)	LFHRGKTPPL
  580-  589 (19.25/10.55)	FLHQSKPEPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.52|      25|      27|     750|     776|       9
---------------------------------------------------------------------------
  750-  776 (37.49/33.91)	MYNLNiSPNHS.QVSLSRvSQ..RFINYEF
  779-  806 (34.02/20.93)	LYTIR.SPKRElEVSLGK.SKihKLRVYNF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15790 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KFSFESSTPSSATSRNSFPGAPKPVFDPPPSTIQSDTMSIKSPFTHRKGPNGKPYELSLPDTDISY
2) TQFGRRSVDTLTPPELSIASMEGDRTSFSQGPGRLQQNKRHDKGNYYSSRP
198
306
263
356










Molecular Recognition Features






MoRF SequenceStartStop




NANANA