<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15770

Description Uncharacterized protein
SequenceMHLTNSMNTYYFPRGARSFTEADSIEQNQSAGATELLVVVFYAHDLSSGCTLQRSGWTRNIDMFSEWLSALPFSGGGFNDALVAEGLAEALMVFSSHNGSQTRQNADGQRHCILVAASKPYLLPTPVNGPVTQILKQRGIIEHTSNVVLADAETVAKAFPRCAVSLSVICPRKLPKLRAIYNAGKRNSQTADPPVDTSKNPNFLVLISEDFSEACAAFSDTEMESLASNQSLVEMDMSSVPPVSGPTATSNPSVMNQQPISAGSIPAAMEPLMVTSVSGPAPPRIPTSQVAAVSQSGLPISVFEEMVPDNENTKPTTPIVSVMTQSLGPFTGAAANIVILNGVTSAIPAAPSVLISGQQGVTSMTGFDPFGRTSQIAQTPVTVLTSGQLGVTSMSGFAPCARTDQINQNSIPESLTSMAPSTSGNSNLCISQLLSNIQGGTGAGNQTTPVMSEGNLPRCQIMQRGIGMHPNVPSEMGTGMRSGIGIMMPNPERTQQRQPRILPLGRNNSAEAHMSGNSNPCISPMLSNNHRDIGAGSQTAPVMIENFPRSQMMQSGRGRHQNVPSGMGTGILSGIGTMMPTPRMTRQGQSRILPLGRNNTGEANMSLSHQQTSVTFPSAQSSYVKFWEGDLYVPRLSEPVVRLQGYMRASASESLAANWPPKMLIEHVISEEHMNERVRPRTERTNLLVFLSMGPHALFNQLQEGNQSAVISLPSQRLILEVSDETTRLNGFLLPSENTVLRPTTPNQQM
Length750
PositionUnknown
OrganismCapsicum baccatum (Peruvian pepper)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
Aromaticity0.05
Grand average of hydropathy-0.218
Instability index50.57
Isoelectric point6.38
Molecular weight80215.12
Publications
PubMed=29089032

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15770
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     623.24|      89|      89|     423|     511|       1
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  125-  192 (41.62/13.28)	................................TP.V.........NGP..V.TQ..ILkQRGI...I..EHtSNVvlaD.AETVAKAfpRCAVSL.....SVICP.RKLPKLRA.....IYNAGKRNSqtAD
  227-  330 (87.72/35.47)	ASNQSL.V.EMDMSSVPPV...SG...PTATSNPsVMnqqpiSAGSIP..A.AMepLM.VTSV...SgpAP.PRI...PtSQVAAVS..QSGLPIsvfeeMVPDNENTKPTTPI.....VSVMTQSLG..PF
  332-  420 (88.97/36.07)	GAAANIVIlNGVTSAIPAA...PSvliSGQQGVT.SM.....T.GFDPfgRtSQ..IA.QTPV...T..VL.T.....S.GQLGVTS..MSGFA........P.CARTDQINQN.....SIPESLTSM..AP
  423-  511 (166.64/73.45)	SGNSNLCI.SQLLSNIQGG...TG...AGNQTTP.VM.....SEGNLP..R.CQ..IM.QRGI...G..MH.PNV...P.SEMGTGM..RSGIGI.....MMPNPERTQQRQPR.....ILPLGRNNS..AE
  515-  602 (152.58/66.69)	SGNSNPCI.SPMLSNNHRD...IG...AGSQTAP.VM.....IE.NFP..R.SQ..MM.QSGR...G..RH.QNV...P.SGMGTGI..LSGIGT.....MMPTPRMTRQGQSR.....ILPLGRNNT..GE
  605-  694 (85.71/34.50)	MSLSHQQT.SVTFPSAQSSyvkFW...EGDLYVP.RL.....SE.PVV..R.LQ..GY.MRASaseS..LA.ANW...P.PKM..LI..EHVISE.....EHMN.ERVRPRTERtnllvFLSMG........
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15770 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ASNQSLVEMDMSSVPPVSGPTATSNPSVMNQQPISA
2) GTGAGNQTTPVMSEGNLPRCQIMQRGIGMHPNVPSEMGTGMRSGIGIMMPNPERTQQRQPRILPLGRNNSAEAHMSGNSNPCISPMLSNNHRDIGAGSQTAPVMIENFPRSQMMQSGRGRHQNVPSGMGTGILSGIGTMMPTPRMTRQGQSRILPLGRNNTGEANMSLSHQQT
227
440
262
612










Molecular Recognition Features






MoRF SequenceStartStop




NANANA