<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15769

Description DnaJ protein-like protein 1
SequenceMKHPYNECKGIGKTFSDQNRCLQCEGEKVIQEKKVLEVHMEKGMQNGQRVTFPSEANKVPKTITGDTVFVLQQKEHPKFKRKGDDHFVEHKLILAEDLYGFKFVLTHLDNRQLLIKSQPGKVVKPDQFKAINDKGKLMYQRPFMRVIWGRLLKGLVIFLCKLTLRAEFYCSTIMVFPYKSDIPRAVWNPPLTQRLQQLRKLLSLPMKVYPLAMGPDVHGTKRTGSIVNGVRVDVESITIDGNIIELEAQTEYKVEVDYNREDFDQENDTMVEYKDVAKLVQSVRVRQRAKRIYRYCGFYFSFQDIAYHDFFCKKPLPLSIFDTHYLHNMVGDTEFRKGKGMQLDQLIQHGSSLKETNLHIQPFDLDAIREAFRLRETTPIDVFLVFHSLKKGIPIVPGKSKSESKDKEKKHEKHKDKDKENEKEHKKHKHIHKDQSKDKDKEKKKDRIGYHDSGAELLSGWRTWRNMARPFGCSASST
Length478
PositionHead
OrganismCapsicum baccatum (Peruvian pepper)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Capsiceae> Capsicum.
Aromaticity0.09
Grand average of hydropathy-0.706
Instability index28.49
Isoelectric point9.41
Molecular weight55754.74
Publications
PubMed=29089032

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
Hsp70 protein binding	GO:0030544	IEA:InterPro
unfolded protein binding	GO:0051082	IEA:InterPro

GO - Biological Process
protein folding	GO:0006457	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15769
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.17|      14|      15|     414|     427|       1
---------------------------------------------------------------------------
  414-  427 (25.35/13.90)	HKDKDKENEKEHKK
  432-  445 (25.83/14.29)	HKDQSKDKDKEKKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.66|      13|      15|      58|      70|       2
---------------------------------------------------------------------------
   58-   70 (23.11/11.76)	KVPK.TITGDTVFV
   75-   88 (20.55/ 9.77)	EHPKfKRKGDDHFV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.52|      16|      16|     295|     310|       6
---------------------------------------------------------------------------
  295-  310 (33.37/21.86)	YC..GFYFSFQDIAY.HDF
  311-  329 (24.15/14.01)	FCkkPLPLSIFDTHYlHNM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.23|      14|      18|     347|     364|       8
---------------------------------------------------------------------------
  347-  364 (20.43/25.98)	IQHGSSLKETNlhiqPFD
  368-  381 (24.80/17.33)	IREAFRLRETT....PID
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15769 with Med19 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) VPGKSKSESKDKEKKHEKHKDKDKENEKEHKKHKHIHKDQSKDKDKEKKKDRIG
396
449










Molecular Recognition Features






MoRF SequenceStartStop




1) HKDKDKENEKEHKKHKHIHKDQSKDKDKEKKKDRIGYHDSGAELLSGW
414
461