<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15703
Description |
mediator of RNA polymerase II transcription subunit 23 isoform X3 |
Sequence | MAVPMETQLQSIFEDVVKTEVIEEAFAGMFMDTPEDERTKLISCLGAFRQYWGSLPQESHEQCVQWIVRFIHSQHSPKRISFLYDCLAMAVETNLLPPKMVCQALIGSETLEWERAQLWSLTFKLIRKIIGGVDYKGVRDLLKAVLDKMQTIPNLVSSAVVQQLLPAREVVEYILDRNACLLPAYFAVTEIRKLYPEGQLSHWLLGSLISDFVDSFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPATLRFPLRGMLPYDKDLFEPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLNIAQHKQRCPVLEEQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDINKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLPMTDYKIALLCNAYSTNSECFTLPMGVLVETIYGNGTVRIPLPGTNCTASCSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHITDFFTGSDSIQGTWCKDILQTIMNFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGFRVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENAPEHWLQSDWHTKHMSYHKKYPEKLYFEGLAEQVNPPMQLQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWCLSETYLKFGMNPREDNVWVPDDTYYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGGDVGNALLNVVLRSQPLVPRENVTAWMNAIGLIITALPEPYWIVLHDRIVSVIGSPALTSDAEWVGYPFQLLDFTACHQSYSEMYCSYVLALAHAVWHHSSIGQLSLIPKFLSEVLKPLVKTEYQLLYIYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDHHSNHLAYMDPICDFLYHIKYMFTGDSVKDQVEKIICTLRPAMKLRLRFITHTSKMEPAAAVATATSASQPTTVSSPAPQTGTGPSSIPLSVPQ |
Length | 1386 |
Position | Tail |
Organism | Ictalurus punctatus (Channel catfish) (Silurus punctatus) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Ostariophysi> Siluriformes>
Ictaluridae> Ictalurus.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.019 |
Instability index | 46.52 |
Isoelectric point | 7.01 |
Molecular weight | 158118.85 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP15703
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 69.80| 19| 65| 1223| 1241| 1
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1223- 1241 (36.98/21.72) HAVWHHSS.IGQLSLIPKFL
1289- 1308 (32.82/18.45) QAVDHHSNhLAYMDPICDFL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 105.19| 34| 66| 90| 155| 2
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90- 129 (52.58/65.57) AVETNLLPPKMVCQALIGSEtlewerAQLWSLTFKL..IRKI
159- 194 (52.61/16.82) AVVQQLLPAREVVEYILDRN......ACLLPAYFAVteIRKL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.92| 14| 43| 335| 362| 3
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335- 358 (18.58/20.40) GTSQLLWqhlssqliffVLFQFAS
378- 391 (27.34/11.73) GRDHLMW..........VLLQFIS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 71.08| 19| 76| 784| 802| 4
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784- 802 (36.14/21.99) NDIITHFSMQGSPPLFLCL
861- 879 (34.93/21.01) NDMVWKYNIVTLDRLILCL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 108.25| 32| 81| 455| 535| 5
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228- 260 (54.41/14.69) RCSLLPVVNNSGA.ICNSWKLDPATLRFPLrGML
473- 505 (53.84/71.61) RNKSLPMTDYKIAlLCNAYSTNSECFTLPM.GVL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.60| 16| 16| 1005| 1020| 6
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1005- 1020 (31.60/17.43) YKFHDRPVTYLYNTL.H
1022- 1038 (25.00/12.45) YERHLRDRTNLKRKLvH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.19| 13| 17| 261| 275| 7
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261- 273 (25.15/18.77) PYDKDLFEPQTGL
281- 293 (26.04/11.94) PYSRDMVCNMLGL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.15| 11| 300| 594| 604| 11
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594- 604 (21.86/12.78) FISQLL...PNVFK
894- 907 (17.29/ 8.51) FIIQLLllkPNDFR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 137.13| 40| 602| 706| 747| 12
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706- 747 (70.12/49.96) HITDFFTGsDSIQGTWCKDI..LQTIMNFTpHNWASHTLSCFPA
1310- 1351 (67.01/38.90) HIKYMFTG.DSVKDQVEKIIctLRPAMKLR.LRFITHTSKMEPA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 83.16| 26| 462| 644| 682| 13
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611- 637 (44.04/32.89) LHTLLEMFSYRM......HHIQPHYrVQLLSHL
651- 682 (39.12/31.02) LHLCVESTALRLitalgsSEVQPQF.TRFLSDP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 96.46| 27| 90| 1073| 1102| 15
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1073- 1102 (45.84/47.48) PdDTYYCKLIGRLVDTMAgkSPGPFPNCDW
1167- 1193 (50.62/37.98) P.EPYWIVLHDRIVSVIG..SPALTSDAEW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.96| 17| 498| 316| 332| 21
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314- 330 (28.46/18.24) LVDLVVYAMERSETEEQ
836- 852 (29.50/19.17) FADFLVYEFSTSAGGQQ
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