<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15697

Description Uncharacterized protein
SequenceMAVVSPAPAITQQMSTINFPEYRVPGNMAATTEIVDEPVARVIEEKIFVAVGKNLKENKSLLIWALQNSGGRKICIIHVHQPAQMIPLMGTKFHASSLKEQEVRAYREIERQEMHKILDGYLFICRKMGVQAEKLYIEMESIENGILELISGHGIRKLVMGAAADKRYSRNMMDVKSKKAISVCQQAPAYCHIWFICKQHLIYTKEGALDANGTECRQSSQQASQNTETGQSNHSRSQSFTLGQKNHPKLTNPAQDLLRRACSVTFGRQGGKSPALALPDNDGRPSAPHNMSDAEGASNVSSASSDECDTLSRSTSRGSLLSTYSSSGMVNVGLVSFDRTEGSEIGSELLTLPHRKEDPIHSTPPSVLDRNIEDPLYDQLEQALSEAVNLRKEAFEAAVRRAKAERDAIEAIRRAKASEGLYAEELRQRKETEEALAKGKEELENIKNEKDEVMEELHIALDQKKSLERQIADNDQMVKELEQKIISAVELLQNYKNERDELQLERDNALKEAEELRKSRTEASSSHMPQFFSDFSFSEIEEATQNFNPSLKVGEGGYGSIYKGLLRHTQVAIKVLHSHSLQGPAEFQQEVDVLSKMRHPNLVTLIGACPEAWTLIYEYLLNGSLEDRLSCRGNSPPLSWQTRIRIATELCSVLIFLHSSKPHSIVHGDLKPANILLDANFVSKLSDFGICRLLSQNEDASVNTTICCRTDPKGTFAYMDPEFLSSGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDKGNLKILLDPLAGDWPFVQAEQLAHMALRCCDMNRKSRPDLASEVWRVLEPMKASCGGSSYFQFGSEEHCQPPPYFICPIFQEVMQDPHVAADGFTYEAEALRGWLDSGHETSPMTNLKLAHTNLVPNHALRSAIQEWLQQQ
Length905
PositionTail
OrganismManihot esculenta (Cassava) (Jatropha manihot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Manihoteae> Manihot.
Aromaticity0.06
Grand average of hydropathy-0.430
Instability index52.06
Isoelectric point5.81
Molecular weight101051.49
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



ECO:0000256	ARBA:ARBA00003861

GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15697
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      88.53|      22|      71|     264|     285|       1
---------------------------------------------------------------------------
  264-  285 (39.08/21.27)	VTFGRQGGK...SPALALPDNDGRP
  310-  328 (17.84/ 6.00)	.TLSRSTSR...GSLLSTYSSSG..
  335-  359 (31.61/15.90)	VSFDRTEGSeigSELLTLPHRKEDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     188.80|      48|      48|     430|     477|       2
---------------------------------------------------------------------------
  386-  428 (44.72/29.28)	....EAVNLRKEAFEaavrRAKAERDAI....E.AIRRAKASE..GLYAEELRQ
  430-  477 (75.99/55.27)	KETEEALAKGKEELE....NIKNEKDEVMEELHIALDQKKSLE..RQIADNDQM
  479-  528 (68.10/48.71)	KELEQKIISAVELLQ....NYKNERDELQLERDNALKEAEELRksRTEASSSHM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.99|      35|      49|     686|     721|       3
---------------------------------------------------------------------------
  686-  721 (61.75/43.31)	SD...FGI..CRLLSQNEDASVNTTICCRTDpKGTF.AYMDP
  733-  773 (46.24/26.94)	SDvysFGIilLRLLTGRPALGITKEVQYALD.KGNLkILLDP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15697 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GTECRQSSQQASQNTETGQSNHSRSQSFTLGQKNHPKLTNPA
2) IGSELLTLPHRKEDPIHSTPPSVLDRNIEDPL
3) QGGKSPALALPDNDGRPSAPHNMSDAEGASNVSSASSDECDTLSRSTSRGSL
4) YAEELRQRKETEEALAKGKEELENIKNEKDE
213
345
269
422
254
376
320
452










Molecular Recognition Features






MoRF SequenceStartStop




NANANA