<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15688

Description Uncharacterized protein
SequenceMAVSLHPVQQTLWDSVLQLTKSAQDKNSDPLLWAIQLSSSLNSAGVMLPSTELAHLLVSYICFENNVPITWKFLEKALAVQIAPPMLVLALLSARVVPNRQLHPAAYRLYMELVKRHAFSFSYQVKGPNYPKIMKSVDEVLRLSQIFGLQVYEPGLLLVEFVFSMVWQLLDASLDDEGLLDLTSKTNSKWLNSLQDMEIDVHKTFSEKRNKLYEGLHNENTTMAIELMGEFLQNKVTSRILYLARRNLPSHWQGFIQRVQQLAAHSAALRNSKHISAEILIQLTSDTRPLLSQECKKKSQQDFHSVMSSGFLRSSAGRCHRASWSVLFLPIDLFLQNAMDGLQVAAIGAVEDLTGLVKALQAVNGTTWHDTFLGLWIAALRLVQREREPSEGPVPRLDTCLCMLLSITTLAVANIIEEEEGELIDETEHSPASQMKEKQGPGKCRHGLITALQLLGDYDSLLIPPESVTSVANQAAAKATLFVSGVNSSNSYYESMSMNDMPSNCSGNMRHLIVEACIARNLLDTTAYFWQGYVNAQSNQIPCGVLGQTPGWSSLMKGSPLTPSLINTLVSTPASSLPEIEKIYEIAVSGSNDEKIAAATILCGASLFRGWNIQEQTILFILKLLSPPVPADYCGSDSYLVDYAPLLSVLLVGISSVDCVQILSLHGLAPLLAGALMPICEVFGSSVPKVSSTSVEGISCHAVFSNAFSLLVRLWRFHYPPIENVMGDKTPVGSHIGPEYLLLVRNSQLASFGTLPRDRIKIRRYSKNLNISLDPIFMDSFPKLKRWYWQHLECIASTFSGLVHGTPVHQLVDALLNMMFRRINRSVQSLTSTTSGSSNSSGPGAEEAYVRLQVPAWDILEATPFALDAALTACAHGRLSPRELATGLKDLADFLPASLATIVSYLSAEVTRGVWGPAFMNGTDWPSPAANLATVEQQIKKILSATGVDVPSLPAEGSSPATLPLPLAALVSLTITYRLDKASERFRVLVGPALNALAAGCPWPCMPIIAALWAQKVKRWSDFLVFSASGTVFHHNNDAVVQLLKSCFTSTLGFSTSHISSNGGVGALLGHGFGCHFSGGITPVAPGILYLRVHRSIRDVMFMTEKILSILMHSVKDIANSGLRRETMEKLKRTKYGTRYGQVSLAAAMMRVKLAASLGASLVWIAGGLSLVQSLILETLPSWFISAHGSEQEGGESGGLVPMLGGYALAYFVVFCGTFAWGVDSQSPASKRRQKVLGSHLEFLASAVDGKISLGCDWATARAYISGFLSLMVTCTPTWVLEVNVDILTRLSKGLRQWSEEELSVALLGLGGAGAMGAAAELIIETGL
Length1328
PositionTail
OrganismManihot esculenta (Cassava) (Jatropha manihot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Manihoteae> Manihot.
Aromaticity0.08
Grand average of hydropathy0.169
Instability index47.45
Isoelectric point6.71
Molecular weight144545.38
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15688
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     620.56|     191|     275|     747|    1021|       1
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  540-  680 (108.09/39.16)	......................................................................................QIPC.GVLGQTP.....GWSSLMKGSpLTPSLIN.TLVS..TP.........ASSLP.......................................eiekiyeiavsgsndekiaaatilcgaslfrgwniqEQTILFIL.....KLLS...PPVPADycGSDSYLV.....DYaPLLSVLLV..GIS.SVDC...V....QILSLHGLAPLLAGALMPiC
  767- 1005 (279.41/262.13)	KNLNISLDPIfmDSFPKLKRWYWQHLECiasTFSGLVhgTPVHQlvdallNMMFRRINRSVQsltsttsgssnssgpgaeeayvrlQVPAwDILEATPFALDAALTACAHGR.LSPRELA.TGLK..DL.........ADFLPASLAtivsylsAEVTRGVWGPAFMNGTDWpsPAANLATV....................................EQQIKKIL.....SATGVDvPSLPAE..GSSPATL.....PL.PLAALVSL..TITYRLDK...ASERFRVLVGPALNALAAGCPWP.C
 1050- 1245 (233.06/141.84)	STLGFSTSHI..SSNGGVGALLGHGFGC...HFSGGI..TPVAP......GILYLRVHRSIR.............................DVM....FMTEKILSILMH....SVKDIAnSGLRreTMeklkrtkygTRYGQVSLA.......AAMMRVKLAASLGASLVW..IAGGLSLV....................................QSLILETLpswfiSAHGSE.....QE..GGESGGLvpmlgGY.ALAYFVVFcgTFAWGVDSqspASKRRQKVLGSHLEFLA........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.89|      26|     360|     371|     396|       3
---------------------------------------------------------------------------
  371-  396 (47.31/25.73)	TFLGLWIAA..LRLVQREREPSEGPVPR
  730-  757 (41.58/21.78)	TPVGSHIGPeyLLLVRNSQLASFGTLPR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15688 with Med33 domain of Kingdom Viridiplantae
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