<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15671

Description Uncharacterized protein
SequenceMAVSLQPNQPTLWDSVLQLTKSAQEKNSDPLLWAIQLSSSLNSAGVVLPSTELAHLLVSHICFENNVPITWKFLEKALTVNIAPPMLVIALLSTRVIPNRQLHPAAYRLYLELVKRHAFAFASQISGPNYPKIMRSVDEVLHLSHIFGLQVCEPGMLLVEFVFSMVWQLLDSSLDDEGLLELTSEKKSKWLTSLQDVEIDGHETFGGKRNELHEGLRKANTTMAIQLIGEFLQKKVTSRILYLARQNMHSHWRGFVQRVRLIAAHSAALRNSEHLTAEILLQLTSDTLPLLSQECKKISQQNFHAVISSGSLTSSTGQCHGASWSVLWLPIDLFLEDAMDGSQVAAVSAVENLTCLVKALQAVNGTTWHDTFLGLWIAALRLVQREREPSEGPVPRIDTCLCMLLSITTVAVANLIEEEEGELIDESEHSPTDQMKEKQSPGKRRKGLITALQLLGDYDSLLTPPQSVTSVANQAAAKATLFISGVSSSNGYYESISMNDMPISCSGNMRHLIVEACIARNLLDTSAYFWPGFVVAHSSQIPRGVLGQIPGWSSLMKGSPLTPSMINTLVATPASSLSEIEKVYEIAVSGSNDEKIAAATILCGASLFRGWNIQEHTVLFIIKLLSPPVPLDYSGSESHLIGYAPILNILLTGIASVDCVQILSLHGLAPLLAGALMPICEVFGSSVPKVSSILSSGEEISCHAVFSNAFSLLVRLWRFHYPPLQNVMGDKTPVGSQIGPEYLLLVRNSQLASFGNSPRDRIKSRRYSKNLNIPSDPIFMDSFPKLKRWYRQHLECIASTFSGLIHGTPVHQLVDALLNMMFRRINRSVQSMPSTTSGSSNSSGPGAEEAYVRLQVPAWDILEATPFALDAALTACAHGKLSPRELATGLKDLADFLPASLATIVSFLSAEVTRGLWKPVFMNGTDWPSPAANLATVEQQIKKIISATGVDVPSLPVGGNSPATLPLPLAALVSLTITYRLDKVSERFLVLVGPALNALAAGCPWPCMPIIAALWVQKVKRWSDFLVFSASGTVFHHNGDAVVQLLKSCFTSTLGFSPPHISSNGGVGALLGHGFGSHFSGGISPVAPGILYLRVHRSIRDVMFMTEKILSILMHSVKEIANSGLPSETVEKLKRMKYGMRYGQISLAAAMMRVKLAASLGASIVWISGGLSLVQSLIQETLPSWFLSAHGSDQDGGKSGGLVAMLGGYALAYFVVLCGTFAWGVDSESSASNRRPKVLGCHLEFLASALDGKISFGCDRSTARAYVSGFLSLMVACTPKWVLEVNVDLLKRLSKGLRRWNEEELAVSLLGLGGVGAMGAAAEFIIETAL
Length1330
PositionTail
OrganismManihot esculenta (Cassava) (Jatropha manihot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Manihoteae> Manihot.
Aromaticity0.07
Grand average of hydropathy0.193
Instability index49.62
Isoelectric point6.95
Molecular weight144167.18
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15671
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.20|      38|     160|    1130|    1167|       1
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 1130- 1167 (64.26/38.34)	VEKLKRMKYGM.RYGQISLAAAMMRVKLAASLGASIVWI
 1287- 1325 (57.93/33.85)	VDLLKRLSKGLrRWNEEELAVSLLGLGGVGAMGAAAEFI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     173.17|      53|     121|     829|     883|       2
---------------------------------------------------------------------------
  829-  883 (89.14/58.08)	VQSMPstTSGSSNSSGPGAEEAYVRLQVP.AWD.ILEATPFALDAALTACAHGKLSP
  952- 1006 (84.03/49.11)	VPSLP..VGGNSPATLPLPLAALVSLTITyRLDkVSERFLVLVGPALNALAAGCPWP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     269.28|      94|     123|     475|     589|       3
---------------------------------------------------------------------------
  475-  589 (131.36/140.40)	AAAK....ATLFisgvsssNGY..YESISM.......NDMPISCSGNMRHLIVEACIArNLLDTsayfwpGFVVAHSSQIprgvLgQIPGWSSLMKGSpLTP......SMINTlVATPASSLSEI..EKVYEIAVS
  597-  711 (137.92/88.85)	AAATilcgASLF.......RGWniQEHTVLfiikllsPPVPLDYSGSESHLIGYAPIL.NILLT......GIASVDCVQI....L.SLHGLAPLLAGA.LMPicevfgSSVPK.VSSILSSGEEIscHAVFSNAFS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.91|      13|     122|       7|      19|       4
---------------------------------------------------------------------------
    7-   19 (26.13/14.38)	PNQPTLW...DSVLQL
  128-  143 (20.78/10.07)	PNYPKIMrsvDEVLHL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     126.93|      39|     133|    1039|    1079|       5
---------------------------------------------------------------------------
 1039- 1079 (64.12/42.15)	GDAVVQ.....LLKSCFTSTLGfSPPHISSNGGVGALLGhGFG.SHF
 1170- 1214 (62.81/32.68)	GLSLVQsliqeTLPSWFLSAHG.SDQDGGKSGGLVAMLG.GYAlAYF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.03|      28|     131|      31|      59|       7
---------------------------------------------------------------------------
   31-   59 (41.56/32.83)	LLWAIqLSSSLNSAGVV.LPSTELAHLLVS
  165-  193 (44.47/29.96)	MVWQL.LDSSLDDEGLLeLTSEKKSKWLTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     123.75|      41|      45|     286|     329|       9
---------------------------------------------------------------------------
  286-  329 (66.34/40.75)	DtlpLLSQECKKISQ.QNFHAVISSGSLTSSTGQCHGASWS....VLWL
  332-  377 (57.41/28.59)	D...LFLEDAMDGSQvAAVSAVENLTCLVKALQAVNGTTWHdtflGLWI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15671 with Med33 domain of Kingdom Viridiplantae
Unable to open file!