<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15666

Description Uncharacterized protein
SequenceMIPINFPEYRAPGNMESTREIEEEPVERVLNEKIYVAVGKNLKKNKSLVIWALKNSRGKKICILHVHQPAQMIPLMGAKFHESSLEEQEVRAYREIERKNMHKMLDEYLLFCQQMRVQAEKLHDEMKSIEKGILKLISSHGIRKLVMGAAAENRYSKNMTDIKSKKAISVCLQAPASCQIRFICKQQLIYTKEGHLDANGAELRSSPQEATSVTETRQSNHLRSPSVTLEQKNHLKFNPAQILFRRAYSVSLGRRGRESLTPASSYNVGGASTSQNRLDVEGALTASSDECDALSRISSRGSLLSTCCPSGIVNFCLVPLVIDDGCEIESELSTRLELKEELCPSSPPSVLDGSKEARLYDELEQAMTEVAISRQKASEEAVRFAKAERDAVETIRRVKASESLYAKESRQRKETEEALAKRKEEHKKMKRERDEVMEELHIALDQEKSLESQIADADQMVKELELKITSSDKMLQNYKKERDELQMERDHALKEADELRKSRAEASSSQMPQFFSEFSFSEIEEATQNSNPSLKIGEGGYGSIYKGVLRRSQVAIKVPHSHSEQGPAEYQQEVDVLSKMRHPNLITLFGACPESWALIYEYLPNGSLEDRLSCRDNSPPLSWQTRTRIATELCSVLIFLHSSKPYSIVHGDLKPANVLLDANFVSKLSDFGICRLLCQNEGSSGNTTICCKTNPKGTFGYMDPIFLISGELTPMSDVYSFGIILLRLLTGRSTLMRIREEVQCALDKGNLKILLDPSAGDWPYVQAEQLAHLAVRCCEMNRENRPDLASEVWRVLEPLRASCGGSSSFRLGSKELSQPPQYFICPIFQEIMQDPHVAADGYTYEAEAIRGWLDSGHDTSPMNNHKLAHSNLVPNHALRSAIKEWLQQ
Length888
PositionTail
OrganismManihot esculenta (Cassava) (Jatropha manihot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Manihoteae> Manihot.
Aromaticity0.06
Grand average of hydropathy-0.497
Instability index50.00
Isoelectric point6.34
Molecular weight100080.89
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15666
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     184.57|      47|      49|     413|     460|       1
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  362-  411 (47.43/23.81)	.ELEQAMTevaisrqKASEEAVRFaKAERDAV..ETIR....RVKASESLYAKE..SRQ
  413-  460 (72.60/43.62)	KETEEALA.......KRKEEHKKM.KRERDEV.MEELHiALDQEKSLESQIADA..DQM
  462-  511 (64.55/34.68)	KELELKIT.......SSDKMLQNY.KKERDELqMERDH.ALKEADELRKSRAEAssSQM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     174.24|      59|     201|     534|     620|       2
---------------------------------------------------------------------------
  248-  319 (94.16/45.35)	Y.SVSLG..RRGRESLTPASSYNVGGASTSQNRLDVegaltassdecdaLSRISSRG..SLLSTCC..........PSGIVNFCL......VP
  541-  620 (80.08/89.59)	YgSIYKGvlRRSQVAIKVPHSHSEQGPAEYQQEVDV.............LSKMRHPNliTLFGACPeswaliyeylPNGSLEDRLscrdnsPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.51|      16|     183|     330|     349|       3
---------------------------------------------------------------------------
  334-  349 (30.44/23.75)	TRLELKEELC.......PSSPPS
  625-  647 (23.07/ 7.20)	TRTRIATELCsvliflhSSKPYS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.51|      25|      49|     651|     677|       5
---------------------------------------------------------------------------
  651-  677 (40.36/29.93)	GDLKPanVLLDANFVSKLSD...FGI..CRLL
  700-  729 (37.15/21.36)	GYMDP..IFLISGELTPMSDvysFGIilLRLL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15666 with Med32 domain of Kingdom Viridiplantae
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