<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15656

Description Uncharacterized protein
SequenceMKIKSKAFSLLLLFLSEFLLGLAAAAANDSPKLGTVIGIDLGTTYSCVGVSRNGHVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAAFNPENTIFDVKRLIGRKFDDPEVQKEIKFLPYKVVNKDGKPYIQVKVKGENKAFSPEEISAMVLGKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGAIAGLNVVRIINEPTAAAIAYGLDKKGREMNILVYDLGGGTFDVSILTIDNGVFEVLSTSGDTHLGGEDFDRRVMEYFIKVIKKKYNKDISKDKRALGKLRRECERAKRALSSQHQVRVEIESLFDGTDFSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKSDINEIVLVGGSTRIPKVQELLKDMFDGRELNKGINPDEAVAYGAAVQGGILSGEGGEETKGLLLLDVTPLSLGIETVGGVMTKLIPRNTVIPTKKSQIFSTYQDQQTTVSIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIEVTFEVDANGILHVKAEDKAAKKSQSITITNDKGRLSQEEIDRMIKEAEEMAEEDRKVKEKIDARNKLEAYIYNMRSTINDKDKLADKIDSDDKGKIDSTLKEALEWLDDNQNAEKDDYEEKLKEVEEVCNPVIKQVYEKSGRSSADSEDEEPVDEL
Length660
PositionUnknown
OrganismManihot esculenta (Cassava) (Jatropha manihot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Manihoteae> Manihot.
Aromaticity0.06
Grand average of hydropathy-0.463
Instability index32.50
Isoelectric point5.28
Molecular weight73138.35
Publications









Function






Annotated function


GO - Cellular Component
cytoplasm	GO:0005737	IBA:GO_Central
endoplasmic reticulum chaperone complex	GO:0034663	IBA:GO_Central
endoplasmic reticulum lumen	GO:0005788	IBA:GO_Central
membrane	GO:0016020	IBA:GO_Central
nucleus	GO:0005634	IBA:GO_Central

GO - Biological Function
ATP binding	GO:0005524	IBA:GO_Central
ATPase activity	GO:0016887	IBA:GO_Central
heat shock protein binding	GO:0031072	IBA:GO_Central
misfolded protein binding	GO:0051787	IBA:GO_Central
protein folding chaperone	GO:0044183	IBA:GO_Central
unfolded protein binding	GO:0051082	IBA:GO_Central

GO - Biological Process
cellular response to unfolded protein	GO:0034620	IBA:GO_Central
chaperone cofactor-dependent protein refolding	GO:0051085	IBA:GO_Central
endoplasmic reticulum unfolded protein response	GO:0030968	IBA:GO_Central
protein refolding	GO:0042026	IBA:GO_Central
ubiquitin-dependent ERAD pathway	GO:0030433	IBA:GO_Central









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15656
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.15|      17|      21|      65|      82|       1
---------------------------------------------------------------------------
   65-   82 (28.08/22.34)	NR..ITPSWVAFtDTERLIG
   87-  105 (27.07/16.37)	NQaaFNPENTIF.DVKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.47|      14|      26|     556|     577|       2
---------------------------------------------------------------------------
  556-  570 (18.81/22.80)	EEDrKVKEKIDARNK
  584-  597 (23.66/ 6.19)	DKD.KLADKIDSDDK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.52|      21|      50|     444|     470|       7
---------------------------------------------------------------------------
  444-  470 (28.03/26.37)	PRNtvIPtkksQIFSTYQ.DQQTTVSIK
  497-  518 (33.48/16.67)	PRG..VP....QIEVTFEvDANGILHVK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.47|      12|      21|     107|     118|      12
---------------------------------------------------------------------------
  107-  118 (20.70/10.08)	KFDDPEVQKEIK
  127-  138 (20.77/10.14)	KDGKPYIQVKVK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15656 with Med37 domain of Kingdom Viridiplantae
Unable to open file!