<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15651

Description Uncharacterized protein
SequenceMELEIRREREMEETILETIKICHHRQEAPLPWAMEVGKCILSLGMSLPSPELGHVLVSYICFHNNHPSLWKFLQQALSSRLLSPIHVLSLLSARVIPNRRSQPEAYRLYLELLGRYAFSLDSIGEEACKQKIIKSVDAALQLSHTYRVQVQELGQVLVLFFFSIVVGLIDSTFNDWGLLMKTPDGPSGPFGSADNKDMDVDARGNYNVGRYEHLELLRKTNSLFAIEVLVKLTESRKAMVLLRIVYLNMPEIFNGLLQRLLFYKANKLASSNAESANQLLERLLANIQRVYDSEYQLNRHQIIRMLIDIKPCKHMSYCNSESGQSSRWVSLDIYMENAMDGKQLHIRPSVAILTEAIKTLQVLNRASWQETFLALWLSALRLVQRERDPVEGPIPHLESRLCILLTIVPLAIANILEDEARFSSSSVQGAGKSGGMESTLEHQVEGNGQTSRKHELILSLQVLGDFSGLLCPPSSVIGAANSAALVAASFISNSNNTKSGLVDANRTDPSINAGGNMRHLIVEACITRNLIDASAYYWPGYVSTSVISLVSDLPPVQKSPWLTFMEGAPLDNSLVNLLLTTPAPSLAEIEKLYHIALDGSAEEKSAAAKILCGASLTRGWNIQEHVVCHVVKLLSPPIPSTHNGQRSHLVDYVPMLNAILFGVSTIDNVQMLSLHGVIPEVAASLMPLCEVYGSLVPTSTNISNSSDEPSIYMVFSNAFLFLLRLWKFYRPPLDQWLSGGGAFGGGLTLEYLLLLRNSRIASHNSAASNEINSDSVQFQSTSDKPVYIDFYPKLRAWYCQNKSCVASTLSGLCNGNPVHQVANKILNMIYSKMTKTGTSSGNSSTLSSNSLCGSTSSGGEDPQQRPMLPAWEVLEAIPFVLEAVLTACAHGKLSSRDLTTGLRDLIDFFPASIGAIISYFAAEITRGTWKPVPMNGTDWPSPAAVLPYIEAEMKEILSVAGVDFPSCSSAAGLSPVMLPLPMAALVSLTITFKLNKGLDHIHAVVGPALENCASGCPWPSVPIIGSLWSQKVRRWHDYIVVSCARSVFRQNKEAVAQLLRSCFSSFLGSVNASTSLLTYQSSVCGLLGSTIGVPGVIGSLAPGFLYLRSCQTIQDIQYVNGLITSLVGEHARESTARWPSSKSSRLKSSQASLSLAATKAREAAMLGASLVCVSGGMNLVQELYMETIPTWLLSSRDAKHGGVSVVSRIVEGYAMAYLLIFTGSYAWGVGARSPAWALSRRAHIVGAHMDFLAGVLEGNISLGCHPATWKAYVSCLVHLVVSFTPAWIQEVRVETLKKLASGLRGWHECELALSLLERGGVAAIGSVVELVNVIN
Length1335
PositionTail
OrganismManihot esculenta (Cassava) (Jatropha manihot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Manihoteae> Manihot.
Aromaticity0.07
Grand average of hydropathy0.131
Instability index49.15
Isoelectric point6.92
Molecular weight145710.36
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15651
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     220.12|      46|     122|     973|    1020|       1
---------------------------------------------------------------------------
  893-  941 (52.85/28.89)	LSSRDLttglrdlidffPASIGAIISY.FAAEITRG......TWKP.VPMN...GTDWPS
  945-  971 (30.89/13.74)	VLP.YI...........EAEMKEILS................VAGV.DFPSCSSAA....
  973- 1020 (78.47/52.59)	LSPVML...........PLPMAALVSLTITFKLNKGLdhIHAVVGP.ALENCASGCPWPS
 1100- 1140 (57.90/32.37)	LAPGFL...........YLRSCQTIQ.DIQY.VN.GL..ITSLVGEhARE...STARWPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     178.57|      46|      50|    1234|    1280|       2
---------------------------------------------------------------------------
 1189- 1232 (24.51/ 6.58)	PTWLLSSRdakhggvsvvSRIVeGYAMAYLL.IFTGSYawGVGAR..............
 1234- 1279 (82.93/49.15)	PAWALSRR..........AHIV.GAHMDFLAGVLEGNI..SLGCHPATWKAYVSCLVHL
 1285- 1330 (71.13/40.95)	PAWIQEVR..........VETL.KKLASGLRGWHECEL..ALSLLERGGVAAIGSVVEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.06|      17|      98|      41|      57|       3
---------------------------------------------------------------------------
   41-   57 (30.40/20.38)	LSLGMSLPSPELGHVLV
  142-  158 (29.65/19.68)	LSHTYRVQVQELGQVLV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.03|      22|     122|     382|     403|       4
---------------------------------------------------------------------------
  382-  403 (41.64/26.15)	LVQRER.DP...VEGPIPHLESRLCI
  501-  526 (31.39/17.92)	LVDANRtDPsinAGGNMRHLIVEACI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      82.85|      18|      44|     206|     223|       5
---------------------------------------------------------------------------
  206-  223 (29.67/22.08)	YNVGRYEHLELLRKTNSL
  224-  241 (25.87/18.21)	FAIEVLVKLTESRKAMVL
  253-  268 (27.31/19.67)	FN.GLLQRL.LFYKANKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      55.82|      12|      46|     425|     436|       6
---------------------------------------------------------------------------
  425-  436 (21.35/13.93)	SSVQGAGK.SGGM
  442-  454 (16.50/ 8.76)	HQVEGNGQtSRKH
  474-  485 (17.96/10.32)	SSVIGAAN.SAAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.74|      34|     162|     688|     723|       7
---------------------------------------------------------------------------
  632-  692 (38.15/23.16)	KLLsppIPSTHNGQRSHLVDYVPML..NAILFgVStidnvqmlslhgvipevaaslmpLCEVY
  693-  729 (50.59/40.72)	GSL...VPTSTNISNSSDEPSIYMVfsNAFLF.LL......................rLWKFY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.07|      29|      72|     768|     797|      11
---------------------------------------------------------------------------
  768-  797 (48.90/35.85)	SNEINSDSVqFQSTSDKPVYIDFYPKLRAW
  843-  871 (54.17/35.10)	SSTLSSNSL.CGSTSSGGEDPQQRPMLPAW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.20|      12|     104|     355|     367|      12
---------------------------------------------------------------------------
  338-  349 (21.70/11.17)	AMDGKQLHIRPS
  356-  367 (18.49/ 7.53)	AIKTLQVLNRAS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15651 with Med33 domain of Kingdom Viridiplantae
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