<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15634

Description Uncharacterized protein
SequenceMAAKSEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMKHWPFKVVSGPGDKPMIVVQYKGEQKQFAPEEISSMVLTKMKEIAEAFLGHTVKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGSRTGEKNVLIFDLGGGTFDVSILTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISTNARALRRLRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDAKMDKAQVNDIVLVGGSTRIPKVQQLLLDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPAKKEQVFSTYSDNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVTAEDKTAGVKNKITITNDKGRLSKEEIERMVQEAEKYKAEDEQVKKKVEAKNALENYAYNMRNTVKDEKIGGKLNPGDKQKIEKAIDETIEWLDRNQLADVDEFEDKLKELEALCNPVISKMYQGGSGEDGPMDGSAQPGSGYGSASSGGSGAGPKIEEVD
Length655
PositionUnknown
OrganismManihot esculenta (Cassava) (Jatropha manihot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Manihoteae> Manihot.
Aromaticity0.06
Grand average of hydropathy-0.438
Instability index33.11
Isoelectric point5.31
Molecular weight71800.45
Publications









Function






Annotated function


GO - Cellular Component
cytoplasm	GO:0005737	IBA:GO_Central

GO - Biological Function
ATP binding	GO:0005524	IBA:GO_Central
ATPase activity	GO:0016887	IBA:GO_Central
heat shock protein binding	GO:0031072	IBA:GO_Central
misfolded protein binding	GO:0051787	IBA:GO_Central
protein folding chaperone	GO:0044183	IBA:GO_Central
unfolded protein binding	GO:0051082	IBA:GO_Central

GO - Biological Process
cellular response to unfolded protein	GO:0034620	IBA:GO_Central
chaperone cofactor-dependent protein refolding	GO:0051085	IBA:GO_Central
protein refolding	GO:0042026	IBA:GO_Central









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15634
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     145.96|      45|      74|     213|     258|       2
---------------------------------------------------------------------------
  213-  258 (71.15/59.73)	VSILTIEEGIfEVKATAGDTHLGGEDFD.NRLVNHFVEEFKRKHKKD
  288-  333 (74.81/57.05)	IEIDSLYEGI.DFYATITRARFEELNMDlFRKCMEPVEKCLRDAKMD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.94|      13|      21|      42|      55|       4
---------------------------------------------------------------------------
   42-   55 (20.34/16.63)	PSYVAFtDTERLIG
   66-   78 (24.59/15.02)	PQNTVF.DAKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     300.18|      70|     468|     101|     170|       5
---------------------------------------------------------------------------
  101-  170 (118.61/78.15)	PGDKPMI......VVQYKGEQKQFAP.EEISSMVLTKMKEIAEAFLGHTVKNAVITVPAYFN..DSQRQATKDAGAIAG
  502-  566 (90.49/57.87)	.GVKNKI......TI..TNDKGRLSK.EEIERMVQEAEKYKAE...DEQVKKKVEAKNALENyaYNMRNTVKDEK.IGG
  570-  634 (91.08/58.30)	PGDKQKIekaideTIEWL.DRNQLADvDEFED....KLKEL.EALC.....NPVIS.KMYQG..GSGEDGPMDGSAQPG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15634 with Med37 domain of Kingdom Viridiplantae
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