<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15631

Description Uncharacterized protein
SequenceMDIDDFRSILESSGVDVWTFIDTAIVVASLDFGTELKERRDKIVEMLYSTCSSGRCRNCDFDVGRISNEHEMKENSIAVKVGGGGGSGSPSTTPRSIHGDEEDDDELDPYAGLFDDEQKKILEIKQHLEDPDQSEDSLVDLLQSLADMDITFKALKETDIGRHVNRLRKNSSNDVRRLVKQLVRKWKEIVDDWVRLNPQGEHASSALMADGDSPQQKIPQNYHHQVPDFAYSPNPQNGSSGSDKNNSEPERKPKSVPRKEAPPRPTQQSLPASASASASHNVQRQKEQQQRERDFDSDRLASARKRLQENYKEALNAKKQRTIQVMDIHEIPKPKNAYFAKNKGGGSQGRHW
Length352
PositionUnknown
OrganismManihot esculenta (Cassava) (Jatropha manihot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Manihoteae> Manihot.
Aromaticity0.05
Grand average of hydropathy-1.012
Instability index49.63
Isoelectric point5.87
Molecular weight39690.44
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15631
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.11|      19|      19|     198|     216|       1
---------------------------------------------------------------------------
  198-  216 (34.44/24.12)	PQGEHASSALMADGDSPQQ
  219-  237 (38.66/28.03)	PQNYHHQVPDFAYSPNPQN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.74|      21|      24|     255|     278|       2
---------------------------------------------------------------------------
  256-  278 (31.37/23.05)	VPR.KEAPPRptQQSLPASASASA
  282-  303 (31.37/12.48)	VQRqKEQQQR..ERDFDSDRLASA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.13|      19|     258|      70|      88|       3
---------------------------------------------------------------------------
   70-   88 (34.76/20.93)	HEM..KENSIAVKVGGGGGSG
  329-  349 (31.36/18.33)	HEIpkPKNAYFAKNKGGGSQG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15631 with Med26 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ENSIAVKVGGGGGSGSPSTTPRSIHGDEEDDDELDPY
2) NPQGEHASSALMADGDSPQQKIPQNYHHQVPDFAYSPNPQNGSSGSDKNNSEPERKPKSVPRKEAPPRPTQQSLPASASASASHNVQRQKEQQQRERDFDSDRLASARKRLQENYKEALNAKKQRTIQVMDIHEIPKPKNAYFAKNKGGGSQGRHW
74
197
110
352










Molecular Recognition Features






MoRF SequenceStartStop




1) KNAYFAKNKG
335
344