<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15629

Description Uncharacterized protein (Fragment)
SequenceMKGADEEHQGITAVAIDADKNSQSAVKWAVENLVHGNNPYCVFIHVQCKTTRHGEHLGNLTREGRAPNQQELQQLFLHYRGFCARRGIETKEVVIHDSDVPNALIDYIVHNKIRNIVLGAAQRNALMRKFKNADVPSTLLKIAPESCAVYVIAKGKVQTFRLARRPLHAPTISTHSTGSAHLAGSAHSAASAHSATSAHSAGSTYSTSLILSPLRHHSPSPPFTPSSNASSTSTSRQENHWDVPIESMHPNYKDKYTFRFNGNSLVASPSIRSPESLLNRDFMSNSEFSGPESFVSANTSFDNFEYSASENSKSSNSSQLAILDAEMARLKLELQQSMELFNSVTKEAVLAKNMVRELHRLQTLDRQDVDEEPINEGAELSLIEMDKQKTVAKEAVQKAKRIAAELVAEKKVHHEAEERKKTLESMENNDFSCRRYTIHDIEIATNHFSASHKIGEGGYGPVFKGVLNHINVAIKVLRPDLSQGQKQFRQEVEVLSNMRHPNMVILLGACPEYGCLVYEFMENGSLEDRLCRKDNTPPIPWRTRFKIAFEIATALLFLHETKPEPLVHRDLKPGNILLDPNLVSKIADVGLARLLPPSVANDVTQYRMTAAAGTFYYIDPEYQQTGMLSVKSDLFSFGVVLLQLLTARPPMGLCYQIQDAIDNGNFPDMLDKSVRDWPVKEALSLAKLAVQCCELRKRDRPELATVVWPELKRLRDFALFSEVERETVIPLYGPNDLISPTRSH
Length744
PositionTail
OrganismManihot esculenta (Cassava) (Jatropha manihot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Manihoteae> Manihot.
Aromaticity0.07
Grand average of hydropathy-0.387
Instability index41.20
Isoelectric point6.87
Molecular weight83159.46
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15629
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.07|      16|      21|     173|     188|       1
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  173-  188 (30.81/19.59)	STHSTGSAHLAGSAHS
  191-  206 (30.26/19.11)	SAHSATSAHSAGSTYS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.42|      26|      32|      43|      74|       2
---------------------------------------------------------------------------
   43-   68 (47.63/40.07)	FIHVQCKTTRHG.EHLGNLTREGRAPN
   76-  102 (42.79/22.41)	FLHYRGFCARRGiETKEVVIHDSDVPN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.46|      15|      16|     274|     289|       3
---------------------------------------------------------------------------
  274-  289 (23.59/23.19)	PESLL..NRDFmSNSEFS
  291-  307 (23.87/16.78)	PESFVsaNTSF.DNFEYS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      67.52|      19|      20|     357|     376|       4
---------------------------------------------------------------------------
  333-  356 (14.56/ 6.72)	ELQ..QSMELfN.SVTKEAVlakNmvR
  357-  376 (27.31/25.40)	ELHrLQTLDR.Q.DVDEEPI...N..E
  379-  398 (25.65/17.61)	ELS.LIEMDK.QkTVAKEAV...Q..K
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.53|      17|     248|     233|     251|       5
---------------------------------------------------------------------------
  212-  228 (32.51/15.85)	SPLRHHSPSPPFTPSSN
  235-  251 (33.02/14.34)	SRQENHWDVPIESMHPN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      59.23|      14|      33|     116|     129|       6
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  116-  129 (20.86/12.50)	IVLGAAQRNALMRK
  138-  151 (18.64/10.44)	TLLKIAPESCAVYV
  152-  165 (19.74/11.46)	IAKGKVQTFRLARR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15629 with Med32 domain of Kingdom Viridiplantae
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