<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15576

Description Uncharacterized protein
SequenceMVATSNQLNNQLEEDPVYDVVIVVEKTANLVPYLDELKTAYLIPTLEHFNGGPPSPIDTGHDYNCTLYCLVTYTAGDTAPEMASECFFPTTSTHEFLQTFDNLQFIGGAGQSCSHVSEGLSTALQCLDEIKQLRYSGKPTQRHCILICNSPPYHITAEESQDYRGYNSEQLASMMGKRGVNLSIISPRKIPALQKLFNEACAGDNFHNVPQAHYAVDPRHLVLLKGFQLQERSISPKFDEKKLLLNVPSPLMTEPLKAVESNFKKPPTNQTGLQQPSPQHVAHVIQPNVNPISQTSTLPMGMQQVTSPQSSVANTGNLAASMDLMGIPMGPGLSKQPMMVQMRPQPIPQSKAQVSSTMTVQGNMQQRLRQQQPQQQDPNLMMRQPMSSTSGPTGMINVQQSGPLMSQHMSQQGMNQQGMMVSQGPSNMMAHMQGPQNPSAMQQQVVGSQNVSTMPQPGTQNMGMIGQSMQTQPMMQPVGSQNQGMMQSNNAQNQGSMMSSGGIPSPGMLQGVGQNTGMMQSSGSQNSGMLHSSNSQNSGNMMQNPNSGMMQNPNSGLMQQGTGVGNLQQQSQMQQQSQMQQSQMQQQQSQMQQQQSQIQQQQQSQIQQQTQIQQQSQQSQVSSSQNLFPFGQQGIQPGFISDVSGQNPLANVGQLPMVPGPTDRRIIWSGTMEYQDRNVQPNNQRSVTFLLNCNVSVDVQDMDISTADWPQKLNIQLLPQPMLAGLQQLCKNSRQVFFHFPNNNANQNPSALQNLYTLMGHGFAGCVRFPPQSDTKIILLMYSAKKKSFIGLIPNDQMGIVQGIKTVVARYRQKQQQQVNAMAGVNAGNSGQGMANQVMAQGPNNAAVPIGGTGMMQSQMPIAVNTAQQQVSQQSQQQTQQPPPQQQQQQQQQQQQQSQLQQTGSAAARQTNLMIQSLPNDLQPGKSREMPFQQQPGPGIDQKKMILQQQQQQQQQVQQQQMMNAHRAKLQQQQLQRMQMQQQQQQQMTNPQLRHLLINTQQQQQLRQQQQQQQLMLQQQQQQQMRGGNPQAQQGLVMGQQGMQGGGMGQMAPQSGQNFMDDFSSIGEIM
Length1070
PositionUnknown
OrganismBiomphalaria glabrata (Bloodfluke planorb) (Freshwater snail)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Mollusca> Gastropoda> Heterobranchia> Euthyneura> Panpulmonata> Hygrophila> Lymnaeoidea> Planorbidae> Biomphalaria.
Aromaticity0.04
Grand average of hydropathy-0.723
Instability index66.59
Isoelectric point8.63
Molecular weight118203.28
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15576
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     852.18|     132|     135|     785|     919|       2
---------------------------------------------------------------------------
  314-  410 (100.50/15.48)	..........................................................................NTGNLAASM..DLMGIPM..GPGLSKQP.....MMV...QMR..P....QPIPQ.................SKAQVSStmtvqgNMQQRLRQQQPQQQDPNLM......MRQPMSSTSgPTGMIN....VQQSGpLMSQHMS
  412-  531 (129.81/22.90)	Q.........GM....N.QQgMMVSQG......PSNMMAHMQGP.....QnpsamQQQVvgsqNvsTMpqPGTqNMGMIGQSM..QTQPMMQpvGSQN.......QGMMQ...S............NN.................AQNQGSM......MSSGGIPSPGMLQGVGQNT......GMMQSSGSQ.NSG..............MLH...
  532-  632 (91.92/13.31)	.......................................................................SS.NSQNSGNMMqnPNSGMMQ..NPN........SGLM.....QQ..G....TGVGNlqqqsqmqqqsqmqqsqMQQQ.........QSQMQQQQSQIQQQQQSQI......QQQTQIQQQ.SQQSQV....SSSQN.LFPFG.Q
  635-  781 (144.05/26.51)	IQPGFIsdvsGQNPlaNvGQ.LPMVPGptdrriIWSGTMEYQDRnvqpnN.....QRSV....T..FL..LNC.NVSVDVQDM...DISTAD..WPQKLNIQ.....LLP...QPM..........LA.................GLQQLCK......NSRQVFFHFPNNNANQNPS......ALQNLYTLM.GHGFAGcvrfPPQSD.TKIILLM
  785-  919 (227.86/50.58)	KKKSFI....GLIP..N.DQ.MGIVQG......IKTVVARYRQK.....Q.....QQQV....N..AM..AGV.NAGNSGQGM..ANQVMAQ..GPNNAAVPiggTGMMQ...SQM..P....IAVNT.................AQQQVSQ......QSQQQTQQPPPQQQQQQQQ......QQQQQSQLQ.QTGSAA....ARQTN.LMIQSLP
  926- 1053 (158.04/30.05)	KSRE.M....PFQQ..Q.PG.PGIDQ........KKMILQQQQQ.....Q.....QQQV....Q..QQ..QMM.NAHRA..KL..QQQQLQR.............MQMQQqqqQQMtnPqlrhLLINT.................QQQQ..Q......LRQQQQQQQLMLQQQQQQQmrggnpQAQQGLVMG.QQGM........QGG.GMGQMAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.38|      30|      56|      39|      70|       3
---------------------------------------------------------------------------
   39-   70 (54.22/40.40)	TAYLIPTLE..HFNGGPP...SPIDTGhdYNCTLYCL
   93-  127 (44.16/25.70)	THEFLQTFDnlQFIGGAGqscSHVSEG..LSTALQCL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15576 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GQNPLANVGQLPMVPGPTDRRIIWSGTMEYQ
2) PLKAVESNFKKPPTNQTGLQQPSPQHVAHVIQPNVNPISQTSTLPMGMQQVTSPQSSVANTGNLAASMDLMGIPMGPGLSKQPMMVQMRPQPIPQSKAQVSSTMTVQGNMQQRLRQQQPQQQDPNLMMRQPMSSTSGPTGMINVQQSGPLMSQHMSQQGMNQQGMMVSQGPSNMMAHMQGPQNPSAMQQQVVGSQNVSTMPQPGTQNMGMIGQSMQTQPMMQPVGSQNQGMMQSNNAQNQGSMMSSGGIPSPGMLQGVGQNTGMMQSSGSQNSGMLHSSNSQNSGNMMQNPNSGMMQNPNSGLMQQGTGVGNLQQQSQMQQQSQMQQSQMQQQQSQMQQQQSQIQQQQQSQIQQQTQIQQQSQQSQVSSSQNLF
3) QQQQQQQLMLQQQQQQQMRGGNPQAQQGLVMGQQGMQGGGMGQMAPQSGQNFMDDFSSIGEIM
4) QQQQVQQQQMMNAHRAKLQQQQLQRMQMQQQQQQQMTNPQLRHLLINTQQQQQ
5) QVNAMAGVNAGNSGQGMANQVMAQGPNNAAVPIGGTGMMQSQMPIAVNTAQQQVSQQSQQQTQQPPPQQQQQQQQQQQQQSQLQQTGSAAARQTNLMIQSLPNDLQPGKSREMPFQQQPGPGIDQKKMILQQ
645
255
1008
953
818
675
628
1070
1005
949










Molecular Recognition Features






MoRF SequenceStartStop




1) FMDDFSSI
1059
1066