<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15575

Description Uncharacterized protein
SequenceMVATSNQLNNQLEEDPVYDVVIVVEKTANLVPYLDELKTAYLIPTLEHFNGGPPSPIDTGHDYNCTLYCLVTYTAGDTAPEMASECFFPTTSTHEFLQTFDNLQFIGGAGQSCSHVSEGLSTALQCLDEIKQLRYSGKPTQRHCILICNSPPYHITAEESQDYRGYNSEQLASMMGKRGVNLSIISPRKIPALQKLFNEACAGDNFHNVPQAHYAVDPRHLVLLKGFQLQERSISPKFDEKKLLLNVPSPLMTEPLKAVESNFKKPPTNQTGLQQPSPQHVAHVIQPNVNPISQTSTLPMGMQQVTSPQSSVANTGNLAASMDLMGIPMGPGLSKQPMMVQMRPQPIPQSKAQVSSTMTVQGNMQQRLRQQQPQQQDPNLMMRQPMSSTSGPTGMINVQQSGPLMSQHMSQQGMNQQGIQPGFISDVSGQNPLANVGQLPMVPGPTDRRIIWSGTMEYQDRNVQPNNQRSVTFLLNCNVSVDVQDMDISTADWPQKLNIQLLPQPMLAGLQQLCKNSRQVFFHFPNNNANQNPSALQNLYTLMGHGFAGCVRFPPQSDTKIILLMYSAKKKSFIGLIPNDQMGIVQGIKTVVARYRQKQQQQVNAMAGVNAGNSGQGMANQVMAQGPNNAAVPIGGTGMMQSQMPIAVNTAQQQVSQQSQQQTQQPPPQQQQQQQQQQQQQSQLQQTGSAAARQTNLMIQSLPNDLQPGKSREMPFQQQPGPGIDQKKMILQQQQQQQQQVQQQQMMNDGHMYYPGHHHYLYHAHRAKLQQQQLQRMQMQQQQQQQMTNPQLRHLLINTQQQQQLRQQQQQQQLMLQQQQQQQMRGGNPQAQQGLVMGQQGMQGGGMGQMAPQSGQNFMDDFSSIGEIM
Length869
PositionUnknown
OrganismBiomphalaria glabrata (Bloodfluke planorb) (Freshwater snail)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Mollusca> Gastropoda> Heterobranchia> Euthyneura> Panpulmonata> Hygrophila> Lymnaeoidea> Planorbidae> Biomphalaria.
Aromaticity0.05
Grand average of hydropathy-0.654
Instability index64.29
Isoelectric point8.50
Molecular weight96776.72
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15575
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     544.27|      71|      72|     669|     739|       1
---------------------------------------------------------------------------
  309-  367 (53.34/ 9.07)	.................QSSVA..NTGNL....AA.SMDL.M..GIP.................MGPGLSKQpMMVQMR.....PQP.I......PQSKaqvsstM...........TVQGNMQQR.
  369-  412 (59.05/10.72)	....RQQ..QP...QQQDPNL..................M.MRQPMSST...............SGPT...G.MINVQQ.....SGP...............................LMSQHMSQQ
  416-  496 (58.39/10.53)	QQGIQPGfiSD...VSGQNPLA..NVG...........QLpMVPG.PTDrriiwsgtmeyqdrnVQPNNQRS.VTFLLN.....CNVSV......DVQD......M...........DISTADWPQK
  511-  593 (56.91/10.10)	QQLCKNS..RQvffHFPNNNAN..QNPSA.............LQNLYTL...............MGHGFAGC.VRFPPQ.....SDTKIillmysAKKK......SfiglipndqmgIVQGIKTVVA
  594-  664 (70.77/14.12)	RYRQKQQ..QQ...VNAMAGVNagNSGQG....MANQ..V.MAQG.PNN.....................AA.VPI........GGTGM......MQSQ......M.piavntaqqqVSQQSQQQTQ
  669-  736 (118.18/27.88)	QQQQQQQ..QQ...QQQQSQLQ..QTGSA....AARQTNL.MIQSLPND...............LQPGKSRE.MPFQQQ.....PGPGI......DQKK......M...........ILQQQQQ...
  737-  804 (74.75/15.28)	QQQQVQQ..QQ...MMNDGHMY..YPGHHhylyHAHRAKL.QQQQL........................QR.MQMQQQqqqqmTNP.........QLR......H...........LLINTQQQQQ
  805-  853 (52.90/ 8.94)	LRQQQQQ..QQlmlQQQQQQQM..RGGNP....QAQQGLV.MGQ...QG...............MQGGGMGQ.MAPQ..................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.43|      21|      56|      48|      70|       2
---------------------------------------------------------------------------
   48-   70 (39.53/25.51)	HFNGGPP...SPIDTGhdYNCTLYCL
  104-  127 (32.90/15.16)	QFIGGAGqscSHVSEG..LSTALQCL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.68|      23|      27|     248|     274|       3
---------------------------------------------------------------------------
  248-  274 (33.26/27.37)	PSPLMTEPLkaVESNFKkpPTNQT.....GLQ
  276-  303 (38.42/19.23)	PSPQHVAHV..IQPNVN..PISQTstlpmGMQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15575 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PLKAVESNFKKPPTNQTGLQQPSPQHVAHVIQPNVNPISQTSTLPMGMQQVTSPQSSVANTGNLAASMDLMGIPMGPGLSKQPMMVQMRPQPIPQSKAQVSSTMTVQGNMQQRLRQQQPQQQDPNLMMRQPMSSTSGPTGMINVQQSGPLMSQHMSQQGMNQQGIQPGFISDVSGQNPLANVGQLPMV
2) QQQQQQQLMLQQQQQQQMRGGNPQAQQGLVMGQQGMQGGGMGQMAPQSGQNFMDDFSSIGEIM
3) QVNAMAGVNAGNSGQGMANQVMAQGPNNAAVPIGGTGMMQSQMPIAVNTAQQQVSQQSQQQTQQPPPQQQQQQQQQQQQQSQLQQTGSAAARQTNLMIQSLPNDLQPGKSREMPFQQQPGPGIDQKKMILQQQQQQQQQVQQQQMMNDGHMYYPGHHHYLYHAHRAKLQQQQLQRMQMQQQQQQQMTNPQLRHLLINTQQQQQ
255
807
602
442
869
804










Molecular Recognition Features






MoRF SequenceStartStop




1) FMDDFSSIGEIM
858
869