<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15538

Description Uncharacterized protein
SequenceMSPDLNSLPVSAPPTGKKGPDGSRPNMLYIMADQLAAPQLAMYNAESQIKTPNLDRLAAASVQFDSAYCPSPLCAPSRMSMITGLLPMKIGAFDNAAQISSEIPTYAHYLRSRGYHTALAGKMHFVGDQLHGYEQRLTSDIYPADFGWAVNWDEPETRLEWYHNASSILQAGPCGRSNQLDYDEEVMFRSTQYLWDHVRQGPGKRPFALTVSLTHPHDPYTITRKYWDLYEDVDIALPKARVPKDELDAHSQRLMRVCDLWDHDLTDDQIKRAKRAYYGSVSYVDDCIGRLLETLRDAGLADDTIVIFSGDHGDMLGERGLWYKMSYFESSVRVPLLVHYPRWFSPRRVSQNVSTLDLLPTICDFIGVKPAPLLPMDGISMLPHLLGREGGHDTVLAEYTGEGTVRPIMMIRRGPWKYITCPADEPQLYNLDDDPLELDNLARLRNQAPQNTAQAKAKAIFAEYDAEAKERWDFDAITAQVLQSQRSRRLVWDALKQGAFTSWDFDPVDDGRTKYIRSTIPLDELERRARYPFVDSKAYSFSKTVDSTRRMATLGLDDDELKSVEQLVARLAQLSSSIQSLKMDILKSNPLPHASSLQASAQILQRNLQTVLDSLAENADLFGRMALHPATNYPGRTQEGVLTQLLRKKLEPDVEELVVEGREAARLATAEGVAALQAIWDELRQWTHDRIATYVRDEAGQVFTAEERAAGTETVRTGLRRALDEESDDEDEEGGDEEDEDAAAAVRARLERGPEPETLLWFAARGDFELPRNVEYERKVGVNRGLEGVNIPPEEVVPDATAAA
Length804
PositionHead
OrganismOphiocordyceps camponoti-rufipedis
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Ophiocordycipitaceae> Ophiocordyceps.
Aromaticity0.08
Grand average of hydropathy-0.481
Instability index48.90
Isoelectric point4.96
Molecular weight90318.45
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
sulfuric ester hydrolase activity	GO:0008484	IEA:InterPro
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15538
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.25|      24|      64|     173|     197|       1
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  173-  197 (43.07/32.24)	PCGR..SNQLDYDEEVMFRSTQyLWDH
  238-  263 (41.18/25.24)	PKARvpKDELDAHSQRLMRVCD.LWDH
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      98.29|      26|      28|     452|     477|       2
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  437-  453 (18.75/ 6.74)	.........ELDNLARLRNQAPQNTA
  454-  479 (42.98/24.42)	QAKAKAIFAEYDAEAKERWDFDAITA
  485-  508 (36.55/19.72)	QRSRRLVWDALKQGAFTSWDFDPV..
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     215.14|      72|     290|     314|     414|       3
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  324-  403 (113.56/135.96)	KMSYFESSvrvPlLVHYPRWFSPRRVSQ.NVST.LDLLPTICDFIG...VKPAPLLP...MDGIsmLPHLLGREGGHDtvLAEYTGEG
  582-  661 (101.59/56.28)	KMDILKSN...P.LPHASSLQASAQILQrNLQTvLDSLAENADLFGrmaLHPATNYPgrtQEGV..LTQLLRKKLEPD..VEELVVEG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     126.53|      29|      33|     697|     726|       4
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  663-  690 (40.82/20.76)	.EAARLATAEGVAA.LQAIWDELRQWTHDR
  697-  726 (42.00/26.00)	DEAGQVFTAEERAAgTETVRTGLRRALDEE
  731-  757 (43.71/22.70)	DEEGGDEEDEDAAA...AVRARLERGPEPE
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     172.04|      55|     468|      47|     103|       5
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   47-  103 (93.60/66.33)	SQIKTPNLDRlaAASVQF.DS.AYCPSPLCAPSRMSMITGLLPMKIGAFDN....AAQISSEI
  518-  578 (78.44/49.61)	STIPLDELER..RARYPFvDSkAYSFSKTVDSTRRMATLGLDDDELKSVEQlvarLAQLSSSI
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     151.28|      45|     160|     113|     162|       6
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  113-  162 (78.62/62.83)	RGYHTALAGKMHFVGDQLHGY.EQRLTSD...IYPADFGwavnwDEPETRLEWY
  275-  323 (72.66/45.14)	RAYYGSVSYVDDCIGRLLETLrDAGLADDtivIFSGDHG.....DMLGERGLWY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15538 with Med8 domain of Kingdom Fungi
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