<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15504

Description Serine/threonine-protein kinase SSN3
SequenceMSLTNPSSASGASGPGSGRTNALKRTVQASFETPSRNMGPQPYQPRYRVRDKYKIMGFISSGTYGRVYKATDRSGRPGEFAIKKFKPDKEGEQLAYTGISQSAIREMSLCTELRHANVVKLIEIILEPKCIYIVFEFCEHDLLQIIHHHTQHPRRPIMPTAIKSIMFQLLNGCLYLHTNWILHRDLKPANIMVSSSGEVKIGDLGLARQFSKPLHSLFSGDKVVVTIWYRAPELILGSHHYGPPIDMWAVGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRSQMQKIVDIMGMPTRDRWPLVGAMPEAGSLSLLMHPHHHHYNKMPNTSLLEKWYMQTINGGNTPAASSSSGTPCPLVSLGAEGYRLLAGLLEYDPQRRLTAAQALQHPFFSSGDRLVASCFEGLKNEYPLRRISPDDEMRTNGSMPGSKRSGLHDDSLGRASKRLKE
Length448
PositionKinase
OrganismCeratocystis fimbriata CBS 114723
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Microascales> Ceratocystidaceae> Ceratocystis.
Aromaticity0.08
Grand average of hydropathy-0.380
Instability index45.65
Isoelectric point9.49
Molecular weight50113.24
Publications
PubMed=23931120
PubMed=24563841

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15504
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.50|      16|     170|     142|     172|       2
---------------------------------------------------------------------------
  142-  158 (25.95/38.15)	LLQIIHHHTQHPRRpIM
  177-  192 (30.56/ 9.18)	HTNWILHRDLKPAN.IM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.95|      11|      33|     370|     380|       3
---------------------------------------------------------------------------
  370-  380 (20.53/11.01)	GLLEYDPQRRL
  404-  414 (20.41/10.92)	GLKNEYPLRRI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15504 with CDK8 domain of Kingdom Fungi
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