<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15481
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPMIMEDSIDVDDLFGDPTSLELGLEGTASTIKGLPQRLDELRLSGCSQKVAWSKLGAITYVSQDGQKVLLRYLHCRPDDGKWTLSEEAPINQVADVHGGHTIAHLLWNESGSELAIVDSCGRISIATILSTLNTINFARQSSMDPDDDWAQPVGLMWLNANRPLFGFHKATRTNDRWNYPAYRRRPLGPLHPVNKPGLALVTKSGHIKLIYQNPDMRWAEVSTELNPVGYLDGLLTHAAMAPAEGSGISIATHSACGKICFYRVQVKWDPPEWDQTPKPGGGPSNVFPTPSFQVLHTKTEILSTVFHPPVHDVDNITGFSPANGAIYNLTHLEIITAPQVLPGTQSATGPCILAVASMPAQNQHGQPPPSGPSSVLVRWQLDTMAQALHPSFDDVVSKKTASNPKSKIAFRRLDDIYFDRFVISIDYTEAGSVLAITHDDSSISFFEARSMRPINENEDVNIVTSMPNAGFTFPIDASGSLHIAFSPSGCLAVVFDGEWQLHLRYMEHSFGMEDGMYDNGKFTCAIAALALGYVRACGTDTSADDILTVVVRQLNPDAQRSFVTEVYSILFTSVDFTEQDKLVNNQSIQKGLSMQAVLGFRSRFQPRAPSSAVPWIILNIRQIMMLVLTFSHYLKSGRDSTHSEPEVLRMILGNVKWILDLAKYLVDDLLEIADTLPADRNSFSLSSKTYESPSLILILSSVPRSFLRHIFRYLSRFPFTFKAANNLSGESYQLFASINNAIEQSSLKTDVCEKMLAHIDSLVTRSYQAAGFGNAERNAPEREMLITCSIPPVLQSAVTSILTETMPLIVRPEVDRMALALYDYSWLGIGDDKRTELFKRTHDVDILKRNVGRLLDPTVAKRRCVRCCEISEDVSFPRSVSMYRWIVKIGVLRTCVCGGSFAMENVEGLDRVPFPVYR |
Length | 919 |
Position | Tail |
Organism | Emmonsia crescens |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Onygenales> Ajellomycetaceae> Emmonsia.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.108 |
Instability index | 49.56 |
Isoelectric point | 5.91 |
Molecular weight | 101928.21 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP15481
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 350.96| 112| 432| 45| 251| 1
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45- 168 (181.36/165.74) SG.CSQKVAwsklgAITYVSQDGQ.......KVLLRY........LHCRPDD..GKWTLSEeaPINQVA.....DVHGGHTIAHLLWNESGSELAIVDSCGRISiATiLSTLNTINFAR.QSSMDPDDDWAQPVGLMwlnANRPLFGF
252- 283 (21.68/48.14) .........................................................................................................AT.HSACGKICFYRvQVKWDP.PEWDQ........TPKPGGG.
349- 472 (147.92/52.94) TGpCILAVA.....SMPAQNQHGQpppsgpsSVLVRWqldtmaqaLHPSFDDvvSKKTASN..PKSKIAfrrldDIYFDRFVISIDYTEAGSVLAITHDDSSIS............FFE.ARSMRPINE.NEDVNIV...TSMPNAGF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 276.55| 92| 163| 559| 659| 2
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559- 659 (139.11/110.21) AQRSFVTEVYSiLFTSVDFT.EQDKLvNNQSIQKGLSMQAVLGFRSrFQPRAPSSA...VPWiilniRQiMMLVLTFSHYLKSGRDSTHSE.......PEVLRMILG..NVKWI
724- 828 (137.43/83.64) AANNLSGESYQ.LFASINNAiEQSSL.KTDVCEKMLAHIDSLVTRS.YQAAGFGNAernAPE.....RE.MLITCSIPPVLQSAVTSILTEtmplivrPEVDRMALAlyDYSWL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 85.78| 26| 192| 660| 720| 3
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226- 251 (46.19/16.46) LNPVGYL.DGLLTHAAMAPAEGSGISI
660- 686 (39.59/89.27) LDLAKYLvDDLLEIADTLPADRNSFSL
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