<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15471

Description Uncharacterized protein
SequenceMAAQPEVPLEEITWRSPHHVQMMGGFLHSNNILFYFAESPFFDPTSNNASLAIQASYNENFRSFIETREAFEGRLKTMQGLEFMVVHDPLQEAAATAAAAAGGKQPQRLPQEPSNVWVIRKQVRKKRTGLGSGVAGGDDEIQVLATYFVVGDSVYMAPSVLKIVGSRMLSTVTSLTKALSVASPLPIFSASYGHTYMPPVPKSLEASRPGGQQSGQQSIANTPMPDISSQSKGGSVPPATTTTTQQPSTSTSTPTSPLTSSSTTMQDSRSLAEAFNLLSRYGDEFMDDAPLLGEPGSFIIGRTSTEPLLVAMRQSTNNKASKAPTPAPSAGVGGGMSKPGTPAAAAAAATAGTTAAPPTIKTDPATLGVVGKAGKGGEKSPTTPGGGRERVKRKKSKISSTAVASLATGTGSS
Length413
PositionHead
OrganismEmmonsia crescens
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Onygenales> Ajellomycetaceae> Emmonsia.
Aromaticity0.06
Grand average of hydropathy-0.292
Instability index57.14
Isoelectric point9.45
Molecular weight42889.84
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15471
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     137.49|      39|      39|     180|     218|       1
---------------------------------------------------------------------------
  155-  186 (33.59/12.08)	.........YMAPSVLKIVGSRmlSTVTS.LTKALSVASPLP
  187-  225 (72.55/33.32)	IFSASYGHTYMPPVPKSLEASR..PGGQQ.SGQQSIANTPMP
  227-  252 (31.35/10.86)	ISSQSKGGS.VPP......ATT..TTTQQpSTSTS.......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.87|      30|      32|     295|     325|       2
---------------------------------------------------------------------------
  295-  325 (47.35/27.52)	PGSFIIGRTST..EPlLVAMRQSTNNKASKAPT
  328-  359 (45.52/22.46)	PSAGVGGGMSKpgTP.AAAAAAATAGTTAAPPT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.59|      18|     201|      69|      90|       3
---------------------------------------------------------------------------
   69-   90 (26.24/31.10)	EAFEgrLKTMQGLEFMvvHD.PL
  273-  291 (31.35/20.93)	EAFN..LLSRYGDEFM..DDaPL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15471 with Med6 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DEFMDDAPLLGEPGSFIIGRTSTEPLLVAMRQSTNNKASKAPTPAPSAGVGGGMSKPGTPAAAAAAATAGTTAAPPTIKTDPATLGVVGKAGKGGEKSPTTPGGGRERVKRKKSKISSTAVASLATGTGSS
2) PPVPKSLEASRPGGQQSGQQSIANTPMPDISSQSKGGSVPPATTTTTQQPSTSTSTPTSPLTSSSTTMQDSRSLAEA
283
198
413
274










Molecular Recognition Features






MoRF SequenceStartStop




1) PAAAAAAATAGTTAAPPTIKTDPATLGVVGKAGKGGEKSPTTPGGGRERVKRKKSKISSTAVASLATGTG
342
411