<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15394
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MTANKMPLILDNAIPVDLNDVDDLFGDDVALSIPLKPQGKQLLGRLDELRSRGCCQSVAWSRLGTIASLTPDGQALQLRFLRCEPENGSWELSEPTTCEIKGTPAIPLVHLEWSAAISPDLAVIDAVGRVAIASFPISLNYPFITRKWDADAVDDSHAVVGSYWLPVAPSAQQKQPYNIIHGPAKKHGNTYQYETSFLHAGGSSHPHSSKSALLCVTMGGMLKMYWSQSNNKIEETVMELESVNSSDELVTHAALASDKRFLLVAIATCSFALKLLRLEIRWAGMGAPSDRSTLPQNVRLSPVLEKTHLASTSWLHSGPNETDQDASAAALSYLHVLPSILDNTGKSTVPPVIVAIRSRAAAESFQTAQSILDRWEVVEERQAVPTAFEQLGSRRKSISLDLPNTTGLRKLDTIVINKVVVGLQTIQFGKILLLTMSDGTVEYRDRFSFEEMFTTEDLTRVMNLRQVGWTFADSGPCQQVAFSPTQCSMMLLGEDGKLRWSKLHYPMGDVGNTMQEAHYVATIAGLAVTAASSLWYQSNYDDMLAVVQPLTSKKRFTQEWVSELIRILKIQVDYSEEVHHDTLMRNSPLQSCLSIMNSLGFRGDAHRRSFQSKLAWVNLNVRNVVVLITLASNTPVTVRDRMSPLDEHEVVDSLTGCVKWSLDLLSWLADSLFALLKDQNFTQRLAPQRFAELAAYLQERNEVSLHLILCSSSRSFLSALCRRVAHLDNLSNKAIEFYRRQAGASDQNGGGRLMHPQLQQAYLRMQQVTRASLINVAEFERLLNALASDIRQAYQTILPSRIKNGPNAPQGKQLEAAIKTAQVQFEVGALLTPSPPMAFLPALKKLFGNDLPAYRTLTDPAALFFSDFALLGILDDETSLAARKASGVYVDLFRKVKLKRGAAGPAWRRCARCTAVMEDVSVGKAGFTFILSQQRRCSCAGHWTLPVESKDTT |
Length | 953 |
Position | Tail |
Organism | Ophiocordyceps unilateralis |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Ophiocordycipitaceae> Ophiocordyceps.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.110 |
Instability index | 46.58 |
Isoelectric point | 7.29 |
Molecular weight | 105386.47 |
Publications | PubMed=26285697
PubMed=28970504
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP15394
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 220.39| 75| 133| 130| 216| 1
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130- 158 (27.73/ 8.44) ...............................................................................................VAIASFPISLNYPFITRKWDA.DAVDDSHA
169- 287 (82.58/71.64) PSAQQKQPYNIIHGPAkkHGNTYQYETSFLHAGGSSHPHSSKSALLCVtmggmlkmywsqsnnkieetvmelesvnssdelvthaalasdkrfllVAIATCSFALKLLRLEIRWAGmGA......
288- 331 (57.94/27.78) PSDRSTLPQNVRLSPV..LEKTHLASTSWLHSGPNETDQDASAAAL...............................................................................
332- 383 (52.15/25.93) ...........................SYLHVLPSILDNTGKSTVPPV........................................ivairsrAAAESFQTAQS...ILDRW...EVVEERQA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 82.07| 27| 53| 585| 616| 2
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585- 616 (31.15/31.25) RNSPLQScLSIMNSLgfRGdAHRRSFQsKLAW
641- 667 (50.92/25.31) RMSPLDE.HEVVDSL..TG.CVKWSLD.LLSW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 134.86| 41| 65| 678| 720| 4
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678- 720 (64.59/53.28) DQNFTQRLAPQRFAElaAYLQERNEVSLHLILCSSSRSFLSAL
746- 786 (70.27/51.46) DQNGGGRLMHPQLQQ..AYLRMQQVTRASLINVAEFERLLNAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 90.92| 25| 420| 53| 80| 5
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53- 79 (43.40/35.65) GCCQSVAWSrlGTIASLTPDGQALQLR
475- 499 (47.53/27.23) GPCQQVAFS..PTQCSMMLLGEDGKLR
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